CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_chr_4.1000603
(
Pichia stipitis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.C_chr_4.1000603
T390017_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_chr_4.1000603
Zinc cluster
7
43
ISCISCRRKKIKCNKLKPCNQCIKRSIPCEFPPTFRN
Links
Other
Zinc cluster
family TFs
Other
Pichia stipitis
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PICST_31732
Scheffersomyces stipitis
PICST_31732
N
0.683
GNLVRS01_PISO0K01330g
Millerozyma farinosa
GNLVRS01_PISO0K01330g
N
0.636
GNLVRS01_PISO0L01331g
Millerozyma farinosa
GNLVRS01_PISO0L01331g
N
0.636
DEHA2G01408g
Debaryomyces hansenii
DEHA2G01408g
N
0.628
PGUG_04654
Candida guilliermondii
PGUG_04654
N
0.612
PGUG_04654
Meyerozyma guilliermondii
PGUG_04654
N
0.612
CANTEDRAFT_133212
Candida tenuis
CANTEDRAFT_133212
N
0.608
DEHA2G01430g
Debaryomyces hansenii
DEHA2G01430g
N
0.584
CTRG_02544
Candida tropicalis
CTRG_02544
N
0.540