CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_28_chr13_5_0000088
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.sca_28_chr13_5_0000088
T390207_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_28_chr13_5_0000088
Zinc cluster
30
67
RSCTECRRRKIRCIFPPSSSVCSHCSTRGSTCIDQNEG
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG88186
Fusarium solani
NechaG88186
N
0.683
GGTG_06579
Gaeumannomyces graminis
GGTG_06579
N
0.577
CADANGAG00001210
Aspergillus niger
CADANGAG00001210
N
0.548
PITC_014490
Penicillium italicum
PITC_014490
N
0.546
ACRE_067160
Acremonium chrysogenum
ACRE_067160
N
0.540