CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_31_chr3_5_0000145
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.sca_31_chr3_5_0000145
T390217_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_31_chr3_5_0000145
Zinc cluster
26
61
TGCITCRERRKKCDEKKPACSTCERLGKRCEKYKAG
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG78454
Fusarium solani
NechaG78454
N
0.683
NechaG68940
Fusarium solani
NechaG68940
N
0.570
estExt_Genewise1Plus.C_sca_12_chr5_2_00169
Nectria haematococca
estExt_Genewise1Plus.C_sca_12_chr5_2_00169
N
0.570
SAPIO_CDS7129
Scedosporium apiospermum
SAPIO_CDS7129
N
0.569
VDBG_03461
Verticillium albo atrum
VDBG_03461
N
0.565
FOXG_12744
Fusarium oxysporum
FOXG_12744
N
0.565
VDBG_03461
Verticillium alfalfae
VDBG_03461
N
0.565
PV07_01614
Cladophialophora immunda
PV07_01614
I
0.561
PV09_04715
Verruconis gallopava
PV09_04715
N
0.557
X797_011430
Metarhizium robertsii
X797_011430
N
0.549
PV08_03740
Exophiala spinifera
PV08_03740
N
0.545
AOL_s00188g132
Arthrobotrys oligospora
AOL_s00188g132
N
0.544
Cob_07663
Colletotrichum orbiculare
Cob_07663
N
0.544
H072_722
Dactylellina haptotyla
H072_722
N
0.544