CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gw1.40.62.1
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
gw1.40.62.1
T390513_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.40.62.1
Zinc cluster
3
40
QVCDNCRFRKVKCDRGMPCKNCSLGDLRCQYQHHIRRR
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG13130
Fusarium solani
NechaG13130
N
0.683
FGRRES_00069
Fusarium graminearum
FGRRES_00069
N
0.656
FPSE_12029
Fusarium pseudograminearum
FPSE_12029
N
0.656
FFUJ_00047
Fusarium fujikuroi
FFUJ_00047
N
0.638
FVEG_00005
Fusarium verticillioides
FVEG_00005
N
0.591
CADAFLAG00001389
Aspergillus flavus
CADAFLAG00001389
N
0.548
TRIVIDRAFT_164135
Trichoderma virens
TRIVIDRAFT_164135
N
0.547
TRIREDRAFT_55105
Trichoderma reesei
TRIREDRAFT_55105
N
0.547
TRIATDRAFT_22871
Trichoderma atroviride
TRIATDRAFT_22871
N
0.547
VHEMI10005
Torrubiella hemipterigena
VHEMI10005
N
0.545