CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gwh1.4.1.1119.1
(
Pichia stipitis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
gwh1.4.1.1119.1
T390539_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gwh1.4.1.1119.1
Zinc cluster
18
56
DGCPNCKAKRIKCSEELPSCHNCIKKNYRCGYLDFPKEK
Links
Other
Zinc cluster
family TFs
Other
Pichia stipitis
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PICST_10382
Scheffersomyces stipitis
PICST_10382
N
0.683
CTRG_01992
Candida tropicalis
CTRG_01992
N
0.669
PGUG_01963
Candida guilliermondii
PGUG_01963
N
0.642
PGUG_01963
Meyerozyma guilliermondii
PGUG_01963
N
0.642
CANTEDRAFT_137370
Candida tenuis
CANTEDRAFT_137370
N
0.627
SPAPADRAFT_150267
Spathaspora passalidarum
SPAPADRAFT_150267
N
0.593
GNLVRS01_PISO0F04691g
Millerozyma farinosa
GNLVRS01_PISO0F04691g
N
0.590
GNLVRS01_PISO0E03282g
Millerozyma farinosa
GNLVRS01_PISO0E03282g
N
0.588
CD36_23560
Candida dubliniensis
CD36_23560
N
0.584
PGUG_01961
Candida guilliermondii
PGUG_01961
N
0.561
PGUG_01961
Meyerozyma guilliermondii
PGUG_01961
N
0.561
CORT_0C03460
Candida orthopsilosis
CORT_0C03460
N
0.556
DEHA2A10890g
Debaryomyces hansenii
DEHA2A10890g
N
0.556
GNLVRS01_PISO0E03260g
Millerozyma farinosa
GNLVRS01_PISO0E03260g
N
0.553
GNLVRS01_PISO0F04669g
Millerozyma farinosa
GNLVRS01_PISO0F04669g
N
0.553
CLUG_02809
Candida lusitaniae
CLUG_02809
N
0.546
CLUG_02809
Clavispora lusitaniae
CLUG_02809
N
0.546
G210_5312
Candida maltosa
G210_5312
N
0.541