1301_YBL005W (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 1301_YBL005W T390751_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PDR3
M00918_2.00 		Saccharomyces cerevisiae
NBCCGCGGRNN
NNYCCGCGGVN		 PBM
Gordan et al.(2011)
Pdr3 		0.667 0.923
PDR3
M08438_2.00 		Saccharomyces cerevisiae
TCCGCGGA
TCCGCGGA		 ChIP-chip
Mathelier et al.(2014)
MA0353.1 		0.667 0.923
PDR3
M08642_2.00 		Saccharomyces cerevisiae
NVCGGA
TCCGBN		 Misc
DeBoer et al.(2011)
YBL005W_1387 		0.667 0.923
PDR3
M08643_2.00 		Saccharomyces cerevisiae
WCHGCGGN
NCCGCDGW		 Misc
DeBoer et al.(2011)
YBL005W_2062 		0.667 0.923
PDR3
M11475_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$PDR3_Q2 		0.667 0.923
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
1301_YBL005W Zinc cluster 13 51

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PDR3 Saccharomyces cerevisiae YBL005W D 0.667
976_YHR166C Saccharomyces paradoxus 976_YHR166C I 0.666
SKUD_189302 Saccharomyces kudriavzevii SKUD_189302 I 0.663
1365_YBL005W Saccharomyces bayanus 1365_YBL005W I 0.547