3145_YDL170W (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 3145_YDL170W T390844_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
UGA3
M00079_2.00 		Saccharomyces cerevisiae
GCGSNNNNN
NNNNNSCGC		 PBM
Badis et al.(2008)
UGA3_4522 		0.683 1.000
UGA3
M07506_2.00 		Saccharomyces cerevisiae
BSGCGGSA
TSCCGCSV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0410.1 		0.683 1.000
UGA3
M08649_2.00 		Saccharomyces cerevisiae
BSGCGGSA
TSCCGCSV		 Misc
DeBoer et al.(2011)
YDL170W_486 		0.683 1.000
UGA3
M08650_2.00 		Saccharomyces cerevisiae
CCGNNNNCGG
CCGNNNNCGG		 Misc
DeBoer et al.(2011)
YDL170W_651 		0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
3145_YDL170W Zinc cluster 15 54

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
UGA3 Saccharomyces cerevisiae YDL170W D 0.683
2597_YDL170W Saccharomyces mikatae 2597_YDL170W I 0.683
SU7_0466 Saccharomyces arboricola SU7_0466 I 0.659
SKUD_160102 Saccharomyces kudriavzevii SKUD_160102 I 0.563
3364_YDL170W Saccharomyces bayanus 3364_YDL170W I 0.543
ZBAI_03104 Zygosaccharomyces bailii ZBAI_03104 I 0.539
ZBAI_08784 Zygosaccharomyces bailii ZBAI_08784 I 0.539
ZYRO0B02574g Zygosaccharomyces rouxii ZYRO0B02574g I 0.539