CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pc20g03000
(
Penicillium chrysogenum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
Pc20g03000
T391783_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_04785
M01375_2.00
Aspergillus nidulans
NCGGANNDN
NHNNTCCGN
PBM
Lambert et al.(2019)
pEX0430
0.550
0.769
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pc20g03000.t1
Zinc cluster
10
48
FACDECRLRKSRCSKERPVCLQCRQLNKECIYSPKVSRS
Links
Other
Zinc cluster
family TFs
Other
Penicillium chrysogenum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PCH_Pc20g03000
Penicillium rubens
PCH_Pc20g03000
I
0.683
U727_0043401141
Penicillium solitum
U727_0043401141
I
0.683
TSTA_100830
Talaromyces stipitatus
TSTA_100830
N
0.618
PDE_01826
Penicillium oxalicum
PDE_01826
N
0.615
PMAA_003160
Talaromyces marneffei
PMAA_003160
I
0.595
PMAA_003160
Penicillium marneffei
PMAA_003160
I
0.595
EURHEDRAFT_476590
Aspergillus ruber
EURHEDRAFT_476590
I
0.592
fgenesh1_pg.00118_#_111
Aspergillus carbonarius
fgenesh1_pg.00118_#_111
I
0.582
CADANGAG00009276
Aspergillus niger
CADANGAG00009276
I
0.574
BDDG_05358
Blastomyces dermatitidis
BDDG_05358
I
0.573
CADAFLAG00011829
Aspergillus flavus
CADAFLAG00011829
I
0.573
AFUA_3G06740
Aspergillus fumigatus
CADAFUAG00005027
I
0.551
NFIA_070510
Neosartorya fischeri
CADNFIAG00006478
I
0.551
ANIA_04785
Aspergillus nidulans
CADANIAG00005637
D
0.550