CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSBTAP00000023928-D1
(
Bos grunniens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ENSBTAP00000023928-D1
T134606_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS1
M02911_2.00
Homo sapiens
MGACCCCCCACGWHGN
NCDWCGTGGGGGGTCK
SELEX
Jolma et al.(2013)
GLIS1_1
0.827
1.000
GLIS1
M04564_2.00
Homo sapiens
BMCCCCCCRCVDHSH
DSDHBGYGGGGGGKV
SELEX
Yin et al.(2017)
GLIS1_eDBD_HT-SELEX
0.827
1.000
GLIS1
M08345_2.00
Homo sapiens
SNSYSYRGGRGGBV
BVCCYCCYRSRSNS
ChIP-seq
Schmitges et al.(2016)
Q8NBF1.MEME
0.827
1.000
GLIS1
M04565_2.00
Homo sapiens
DCWHNGTGGGGGGTV
BACCCCCCACNDWGH
SELEX
Yin et al.(2017)
GLIS1_eDBD_Methyl-HT-SELEX
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000023928-D1
C2H2 ZF
318
345
FTCFWAGCVRRYKPFNARYKLLIHMRVH
ENSBTAP00000023928-D1
C2H2 ZF
352
375
KCMFEGCSKAFSRLENLKIHLRSH
ENSBTAP00000023928-D1
C2H2 ZF
381
405
YLCQHPGCQKAFSNSSDRAKHQRTH
ENSBTAP00000023928-D1
C2H2 ZF
411
435
YACQIPGCSKRYTDPSSLRKHVKAH
Links
Other
C2H2 ZF
family TFs
Other
Bos grunniens
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy