CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm000293
(
Prunus mume
)
ARID/BRIGHT,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF00505 (HMG_box)
IPR001606
IPR000910
Pm000293
T017098_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm000293
ARID/BRIGHT
58
143
SSDLFWEKLKEFHDSFRTKFVIPTVGGKALDLHLLFVEVTSRGGLEKVIRDRKWKEVIVVFNFPTTITSASFVLRKYYSSLLYHFE
Pm000293
Sox
255
322
PKSNRSGYNFFFAEHYARLKPLYYGQERAISKKIGFLWNNLTEAEKQVYQEKGMQDKERYRTEMLEYK
Links
Other
ARID/BRIGHT,Sox
family TFs
Other
Prunus mume
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy