CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSHAG00000012439
(
Sarcophilus harrisii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSHAG00000012439
T110047_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zkscan1
M00771_2.00
Mus musculus
NNNHDHDNNN
NNNHDHDNNN
PBM
Weirauch et al.(2013)
pTH2280
0.809
0.964
Zkscan1
M08985_2.00
Mus musculus
DVHDBNCCTACTRTGTGCH
DGCACAYAGTAGGNVHDBH
Misc
Kulakovskiy et al.(2013)
ZKSC1_MOUSE.H11MO.0.A
0.809
0.964
ZKSCAN1
M05847_2.00
Homo sapiens
NNNCCTACTAHGH
DCDTAGTAGGNNN
SMiLE-seq
Isakova et al.(2017)
ZKSCAN1
0.808
0.957
ZKSCAN1
M08874_2.00
Homo sapiens
DVHDBNCCTACTRTGTGCH
DGCACAYAGTAGGNVHDBH
Misc
Kulakovskiy et al.(2013)
ZKSC1_HUMAN.H11MO.0.B
0.808
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSHAP00000014571
C2H2 ZF
373
395
HKCDECGKCFTRSSSLIRHRIIH
ENSSHAP00000014571
C2H2 ZF
401
423
YECNECGKAFSLNSNLILHQRIH
ENSSHAP00000014571
C2H2 ZF
429
451
HECNECGKAFSHSSNLILHQRIH
ENSSHAP00000014571
C2H2 ZF
457
479
YECNECGKAFSQSSDLTKHQRIH
ENSSHAP00000014571
C2H2 ZF
485
507
YECNECGKAFNRNSYLILHRRIH
ENSSHAP00000014571
C2H2 ZF
513
535
YKCNKCGKAFTRSSTLTLHHRIH
Links
Other
C2H2 ZF
family TFs
Other
Sarcophilus harrisii
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy