CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g008805m.g
(
Citrus sinensis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
orange1.1g008805m.g
T028424_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g008805m
BED ZF
74
116
SVYLKFFETAPDGKSRRCKFCGQSYSIATATGNLGRHLANRHP
orange1.1g008857m
BED ZF
72
114
SVYLKFFETAPDGKSRRCKFCGQSYSIATATGNLGRHLANRHP
orange1.1g009265m
BED ZF
59
101
SVYLKFFETAPDGKSRRCKFCGQSYSIATATGNLGRHLANRHP
Links
Other
BED ZF
family TFs
Other
Citrus sinensis
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy