CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aan_R008874
(
Calypte anna
)
bHLH,T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
PF00907 (T-box)
IPR001092
IPR001699
Aan_R008874
T055485_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MGA
M02821_2.00
Homo sapiens
RGGTGTGA
TCACACCY
SELEX
Jolma et al.(2013)
MGA_1
0.889
0.889
MGA
M02822_2.00
Homo sapiens
AGGTGTKAHDTMACACCT
AGGTGTKAHDTMACACCT
SELEX
Jolma et al.(2013)
MGA_2
0.889
0.889
MGA
M02823_2.00
Homo sapiens
VGTGTKAWWWTTCACRCB
VGYGTGAAWWWTMACACB
SELEX
Jolma et al.(2013)
MGA_3
0.889
0.889
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aan_R008874
T-box
78
261
VTLDNNSMWNEFYHRNTEMILTKQGRRMFPYCRYWITGLDAFQRYILVMDISPVDNHRYKWNGRWWEPSGKAEPHVLGRVFIHPESPCTGQYWMHKPVSFYKLKLTNNTLDQEGHIILHSMHRYLPRLHLVPADKATEVIQLNGPDVHTFTFPQTEFFAVTAYQNIQITQLKIDYNPFAKGFRD
Aan_R008874
bHLH
2398
2449
YRQTHTANERRRRSQMKGLFEKLKRALGLHNLPKVSKSYILKQAYEEIQGLT
Links
Other
bHLH,T-box
family TFs
Other
Calypte anna
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy