CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN07656
(
Caenorhabditis brenneri
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
CBN07656
T057959_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NRL
M02835_2.00
Homo sapiens
VTCAGCRNDHN
NDHNYGCTGAB
SELEX
Jolma et al.(2013)
NRL_1
0.807
0.429
NRL
M04277_2.00
Homo sapiens
NGTCAGCRNDWHN
NDWHNYGCTGACN
SELEX
Yin et al.(2017)
NRL_eDBD_HT-SELEX
0.807
0.429
NRL
M04279_2.00
Homo sapiens
HGTCAGCANWWWH
DWWWNTGCTGACD
SELEX
Yin et al.(2017)
NRL_FL_HT-SELEX
0.807
0.429
NRL
M04278_2.00
Homo sapiens
NRTCAGCRNDWHN
NDWHNYGCTGAYN
SELEX
Yin et al.(2017)
NRL_eDBD_Methyl-HT-SELEX
0.807
0.429
NRL
M04280_2.00
Homo sapiens
HGTCAGCRNWWHN
NDWWNYGCTGACD
SELEX
Yin et al.(2017)
NRL_FL_Methyl-HT-SELEX
0.807
0.429
tj
M03632_2.00
Drosophila melanogaster
HGTCAGCANWWH
DWWNTGCTGACD
SELEX
Nitta et al.(2015)
tj_1
0.793
0.429
tj
M03633_2.00
Drosophila melanogaster
NNNYGCHDHGTCAGCANWW
WWNTGCTGACDHDGCRNNN
SELEX
Nitta et al.(2015)
tj_2
0.793
0.429
tj
M06015_2.00
Drosophila melanogaster
GCKDMSTCAGCA
TGCTGASKHMGC
B1H
Zhu et al.(2011)
tj_SANGER_5_FBgn0000964
0.793
0.429
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN07656
bZIP
1005
1060
MQWKQKRRTLKNRGYALNCRAKRLRTQTQLEQENAILRNEVKVLQERLADSQMRLH
Links
Other
bZIP
family TFs
Other
Caenorhabditis brenneri
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy