CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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8601_YGL071W
(
Saccharomyces paradoxus
)
AFT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08731 (AFT)
IPR014842
8601_YGL071W
T000286_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AFT1
M01513_2.00
Saccharomyces cerevisiae
NNGGGTGCAHN
NDTGCACCCNN
PBM
Zhu et al.(2009)
Aft1
0.910
0.910
AFT1
M08470_2.00
Saccharomyces cerevisiae
RGGTGCA
TGCACCY
Misc
DeBoer et al.(2011)
YGL071W_658
0.910
0.910
AFT1
M09699_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RCS1_Q2
0.910
0.910
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
8601_YGL071W
AFT
110
246
FKDKSDIKPWLQKIFYPQGIELVIERSDTFKVVFKCKAAKRGRNARRKRKDRLNGQDQEEEKSKTNDDELEYTSPSNFTVAPNGPQSSPDQSSSIKPKKKRCVSRFNNCPFRVRATYSLKRKRWSIVVMNNNHSHLL
Links
Other
AFT
family TFs
Other
Saccharomyces paradoxus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sakowv30034958m.g
Saccoglossus kowalevskii
Sakowv30034958m.g
N
0.000
Sakowv30034964m.g
Saccoglossus kowalevskii
Sakowv30034964m.g
N
0.000
Sakowv30036998m.g
Saccoglossus kowalevskii
Sakowv30036998m.g
N
0.000
Sakowv30037001m.g
Saccoglossus kowalevskii
Sakowv30037001m.g
N
0.000
Sakowv30037004m.g
Saccoglossus kowalevskii
Sakowv30037004m.g
I
0.000
Sakowv30037007m.g
Saccoglossus kowalevskii
Sakowv30037007m.g
I
0.000
Sakowv30037030m.g
Saccoglossus kowalevskii
Sakowv30037030m.g
N
0.000
Sakowv30037036m.g
Saccoglossus kowalevskii
Sakowv30037036m.g
N
0.000
Sakowv30037039m.g
Saccoglossus kowalevskii
Sakowv30037039m.g
I
0.000
Sakowv30037041m.g
Saccoglossus kowalevskii
Sakowv30037041m.g
N
0.000
Sakowv30037050m.g
Saccoglossus kowalevskii
Sakowv30037050m.g
I
0.000