BGIOSGA018232 (Oryza indica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BGIOSGA018232 T000625_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
abi4
M02648_2.00
Zea mays
CGSYGCYBYB

VRVRGCRSCG
SELEX
Mathelier et al.(2014)
MA0123.1
0.819 1.000
abi4
M09706_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABI4_01
0.819 1.000
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA018232-PA AP2 48 99

Links

Other AP2 family TFs
Other Oryza indica TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SPL13A Arabidopsis thaliana AT5G50670 D 0.000
Sb02g029300 Sorghum bicolor Sb02g029300 I 0.000
Pm024528 Prunus mume Pm024528 I 0.000
Pm025028 Prunus mume Pm025028 I 0.000
29929.m004627 Ricinus communis 29929.m004627 I 0.000
30147.m014478 Ricinus communis 30147.m014478 I 0.000
cassava17811.valid.m1 Manihot esculenta cassava17811.valid.m1 I 0.000
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.000
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.000
Cucsa.054050 Cucumis sativus Cucsa.054050 I 0.000
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.000
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.000
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.000
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.000
mgf003797m Mimulus guttatus mgf003797m I 0.000
mgf010913m Mimulus guttatus mgf010913m I 0.000
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.000
Cla019579 Citrullus lanatus Cla019579 I 0.000
Cla004156 Citrullus lanatus Cla004156 I 0.000
Cla002666 Citrullus lanatus Cla002666 I 0.000
Sb03g044160 Sorghum bicolor Sb03g044160 I 0.000
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.000
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.000
Si001804m.g Setaria italica Si001804m.g I 0.000
Si026656m.g Setaria italica Si026656m.g I 0.000
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I 0.000
TCM_008671 Theobroma cacao TCM_008671 I 0.000
TCM_011483 Theobroma cacao TCM_011483 I 0.000
TCM_014668 Theobroma cacao TCM_014668 I 0.000
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.000
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.000
Ca_01426 Cicer arietinum Ca_01426 I 0.000
Ca_05711 Cicer arietinum Ca_05711 I 0.000
Ca_19449 Cicer arietinum Ca_19449 I 0.000
Cla001541 Citrullus lanatus Cla001541 I 0.000
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.000
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.000
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.000
MDP0000146640 Malus domestica MDP0000146640 I 0.000
MDP0000193702 Malus domestica MDP0000193702 I 0.000
MDP0000778465 Malus domestica MDP0000778465 I 0.000
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.000
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.000
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.000
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.000
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I 0.000
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.000
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.000
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I 0.000
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.000
SapurV1A.1460s0110 Salix purpurea SapurV1A.1460s0110 I 0.000
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.000
PK02140.1 Cannabis sativa PK02140.1 I 0.000
MDP0000119458 Malus domestica MDP0000119458 I 0.000
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.000
Lus10011348.g Linum usitatissimum Lus10011348.g I 0.000
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.000
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.000
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.000
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.000
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.000
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.000
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.000
gene01338-v1.0-hybrid Fragaria vesca gene01338-v1.0-hybrid I 0.000
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.000
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.000
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.000
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.000
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.000
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.000
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.000
PK19500.1 Cannabis sativa PK19500.1 I 0.000
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.000
GRMZM2G106798 Zea mays GRMZM2G106798 I 0.000
GRMZM2G371033 Zea mays GRMZM2G371033 I 0.000
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.000
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.000
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I 0.000
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I 0.000
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.000
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.000
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.000
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I 0.000
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.000
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.000
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.000
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.000
LPERR01G36700 Leersia perrieri LPERR01G36700 I 0.000
LPERR08G18310 Leersia perrieri LPERR08G18310 I 0.000
GRMZM2G061734 Zea mays GRMZM2G061734 I 0.000
GLYMA19G26390 Glycine max GLYMA19G26390 I 0.000
SPL13A Arabidopsis thaliana AT5G50570 I 0.000
BGIOSGA005075 Oryza indica BGIOSGA005075 I 0.000
Bo3g024180 Brassica oleracea Bo3g024180 I 0.000
Bo9g097630 Brassica oleracea Bo9g097630 I 0.000
Bra022766 Brassica rapa Bra022766 I 0.000
BRADI2G59110 Brachypodium distachyon BRADI2G59110 I 0.000
BRADI3G41250 Brachypodium distachyon BRADI3G41250 I 0.000
BRADI4G34667 Brachypodium distachyon BRADI4G34667 I 0.000
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.000
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.000
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.000
GLYMA05G38180 Glycine max GLYMA05G38180 I 0.000
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.000
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.000
GLYMA16G05895 Glycine max GLYMA16G05895 I 0.000
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.000
LPERR09G11920 Leersia perrieri LPERR09G11920 I 0.000
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.000
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.000
OPUNC08G19660 Oryza punctata OPUNC08G19660 I 0.000
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I 0.000
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.000
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I 0.000
OS01G0922600 Oryza sativa OS01G0922600 I 0.000
SPL16 Oryza sativa OS08G0531600 I 0.000
SPL18 Oryza sativa OS09G0507100 I 0.000
SPL19 Oryza sativa OS11G0496600 I 0.000
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I 0.000
POPTR_0001s13630 Populus trichocarpa POPTR_0001s13630 I 0.000
POPTR_0003s16780 Populus trichocarpa POPTR_0003s16780 I 0.000
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.000
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.000
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.000
OPUNC01G41070 Oryza punctata OPUNC01G41070 I 0.000
ONIVA09G16860 Oryza nivara ONIVA09G16860 I 0.000
OGLUM08G22810 Oryza glumaepatula OGLUM08G22810 I 0.000
MLOC_52321 Hordeum vulgare MLOC_52321 I 0.000
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I 0.000
OBART09G15750 Oryza barthii OBART09G15750 I 0.000
OBART01G42150 Oryza barthii OBART01G42150 I 0.000
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.000
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.000
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.000
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.000
OGLUM09G16320 Oryza glumaepatula OGLUM09G16320 I 0.000
OMERI01G39190 Oryza meridionalis OMERI01G39190 I 0.000
OMERI06G13610 Oryza meridionalis OMERI06G13610 I 0.000
OMERI11G11920 Oryza meridionalis OMERI11G11920 I 0.000
ONIVA01G48230 Oryza nivara ONIVA01G48230 I 0.000
ONIVA08G24550 Oryza nivara ONIVA08G24550 I 0.000
Gorai.012G185700 Gossypium raimondii Gorai.012G185700 N 0.000
GRMZM2G101511 Zea mays GRMZM2G101511 N 0.000
Sb07g026220 Sorghum bicolor Sb07g026220 N 0.000
Lus10003126.g Linum usitatissimum Lus10003126.g N 0.000
Si013747m.g Setaria italica Si013747m.g N 0.000
Pavir.J30793 Panicum virgatum Pavir.J30793 N 0.000
Pavir.J28847 Panicum virgatum Pavir.J28847 N 0.000
Pavir.Fb00717 Panicum virgatum Pavir.Fb00717 N 0.000
ORUFI08G24030 Oryza rufipogon ORUFI08G24030 N 0.000
VIT_14s0068g01780 Vitis vinifera VIT_14s0068g01780 N 0.000
Pavir.Ba01534 Panicum virgatum Pavir.Ba01534 N 0.000