Bo2g008700 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo2g008700 T000736_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF106
M01628_2.00 		Arabidopsis thaliana
NNNVCRVCN
NGBYGBNNN		 PBM
Weirauch et al.(2014)
pTH7426 		0.792 0.904
ERF104
M06682_2.00 		Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH
DRYGGCGGCGGHKRHDDNN		 Dap-seq
OMalley et al.(2016)
ERF104_col_a 		0.678 0.731
ERF104
M06683_2.00 		Arabidopsis thaliana
BHDSCGCCGCCRYHD
HDRYGGCGGCGSHDV		 Dap-seq
OMalley et al.(2016)
ERF104_colamp_a 		0.678 0.731
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g008700.1 AP2 86 138

Links

Other AP2 family TFs
Other Brassica oleracea TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo9g175610 Brassica oleracea Bo9g175610 I 0.792
Bra009250 Brassica rapa Bra009250 I 0.792
ERF106 Arabidopsis thaliana AT5G07580 D 0.792
scaffold_600764.1 Arabidopsis lyrata scaffold_600764.1 I 0.792
Cagra.2925s0026 Capsella grandiflora Cagra.2925s0026 I 0.792
Bostr.13129s0205 Boechera stricta Bostr.13129s0205 I 0.792
Thhalv10014666m.g Eutrema salsugineum Thhalv10014666m.g I 0.792
Carubv10001989m.g Capsella rubella Carubv10001989m.g I 0.792
SapurV1A.0059s0650 Salix purpurea SapurV1A.0059s0650 I 0.779
POPTR_0001s11800 Populus trichocarpa POPTR_0001s11800 I 0.778
TCM_014850 Theobroma cacao TCM_014850 I 0.776
SapurV1A.1065s0040 Salix purpurea SapurV1A.1065s0040 I 0.775
cassava21353.m1 Manihot esculenta cassava21353.m1 I 0.775
Cucsa.094100 Cucumis sativus Cucsa.094100 I 0.772
gene21167-v1.0-hybrid Fragaria vesca gene21167-v1.0-hybrid I 0.772
Cla010887 Citrullus lanatus Cla010887 I 0.772
evm.TU.supercontig_13.253 Carica papaya evm.TU.supercontig_13.253 I 0.769
POPTR_0003s15060 Populus trichocarpa POPTR_0003s15060 I 0.769
Bra028690 Brassica rapa Bra028690 I 0.767
PK26398.1 Cannabis sativa PK26398.1 I 0.766
Carubv10027835m.g Capsella rubella Carubv10027835m.g I 0.766
Thhalv10005285m.g Eutrema salsugineum Thhalv10005285m.g I 0.766
Bostr.26833s0077 Boechera stricta Bostr.26833s0077 I 0.766
Cagra.0542s0054 Capsella grandiflora Cagra.0542s0054 I 0.766
ERF107 Arabidopsis thaliana AT5G61590 I 0.766
fgenesh2_kg.8__2142__AT5G61590.1 Arabidopsis lyrata fgenesh2_kg.8__2142__AT5G61590.1 I 0.766
PRUPE_ppa022802mg Prunus persica PRUPE_ppa022802mg I 0.765
Pm019544 Prunus mume Pm019544 I 0.765
PK01935.1 Cannabis sativa PK01935.1 I 0.765
MDP0000517262 Malus domestica MDP0000517262 I 0.765
Bra012939 Brassica rapa Bra012939 I 0.764
Bo7g098850 Brassica oleracea Bo7g098850 I 0.764
Bo9g014660 Brassica oleracea Bo9g014660 I 0.755
Bra035919 Brassica rapa Bra035919 I 0.755
cassava44000.valid.m1 Manihot esculenta cassava44000.valid.m1 I 0.751
30147.m014329 Ricinus communis 30147.m014329 I 0.751
Gorai.007G046100 Gossypium raimondii Gorai.007G046100 I 0.751
Gorai.001G051100 Gossypium raimondii Gorai.001G051100 I 0.748
GLYMA20G33800 Glycine max GLYMA20G33800 I 0.746
Ciclev10005863m.g Citrus clementina Ciclev10005863m.g I 0.746
orange1.1g030002m.g Citrus sinensis orange1.1g030002m.g I 0.746
MTR_1g090290 Medicago truncatula MTR_1g090290 I 0.744
Solyc05g052030.1 Solanum lycopersicum Solyc05g052030.1 I 0.740
GLYMA20G16920 Glycine max GLYMA20G16920 I 0.738
GLYMA10G23460 Glycine max GLYMA10G23460 I 0.738
mgf025885m Mimulus guttatus mgf025885m I 0.736
PGSC0003DMG400016004 Solanum tuberosum PGSC0003DMG400016004 I 0.735
mgf019541m Mimulus guttatus mgf019541m I 0.734
Eucgr.K00128 Eucalyptus grandis Eucgr.K00128 I 0.733
PGSC0003DMG400036566 Solanum tuberosum PGSC0003DMG400036566 I 0.733
Cucsa.129330 Cucumis sativus Cucsa.129330 I 0.729
Cla003678 Citrullus lanatus Cla003678 I 0.725
GLYMA10G33810 Glycine max GLYMA10G33810 I 0.721
VIT_16s0013g00900 Vitis vinifera VIT_16s0013g00900 I 0.712
Solyc03g093560.1 Solanum lycopersicum Solyc03g093560.1 I 0.704
Solyc03g093540.1 Solanum lycopersicum Solyc03g093540.1 I 0.704
PGSC0003DMG400010753 Solanum tuberosum PGSC0003DMG400010753 I 0.704
PGSC0003DMG400040046 Solanum tuberosum PGSC0003DMG400040046 I 0.704
Solyc03g093550.1 Solanum lycopersicum Solyc03g093550.1 I 0.704
Gorai.001G051200 Gossypium raimondii Gorai.001G051200 I 0.703
chr5.CM0909.360.nc Lotus japonicus chr5.CM0909.360.nc I 0.701
Ca_20349 Cicer arietinum Ca_20349 I 0.701
GSMUA_Achr1G00490_001 Musa acuminata GSMUA_Achr1G00490_001 I 0.700
Bostr.26833s0076 Boechera stricta Bostr.26833s0076 I 0.698
Lus10013959.g Linum usitatissimum Lus10013959.g I 0.698
Eucgr.E00377 Eucalyptus grandis Eucgr.E00377 I 0.695
gene04916-v1.0-hybrid Fragaria vesca gene04916-v1.0-hybrid I 0.693
MTR_1g040430 Medicago truncatula MTR_1g040430 I 0.693
Bra029319 Brassica rapa Bra029319 I 0.693
Bo2g161480 Brassica oleracea Bo2g161480 I 0.693
mgf021756m Mimulus guttatus mgf021756m I 0.693
Gorai.008G108600 Gossypium raimondii Gorai.008G108600 I 0.693
Carubv10028209m.g Capsella rubella Carubv10028209m.g I 0.692
Cagra.0542s0055 Capsella grandiflora Cagra.0542s0055 I 0.692
VIT_16s0013g01090 Vitis vinifera VIT_16s0013g01090 I 0.691
VIT_16s0013g01110 Vitis vinifera VIT_16s0013g01110 I 0.691
Ca_23626 Cicer arietinum Ca_23626 I 0.691
VIT_16s0013g01000 Vitis vinifera VIT_16s0013g01000 I 0.691
Solyc03g093530.1 Solanum lycopersicum Solyc03g093530.1 I 0.690
MTR_1g048610 Medicago truncatula MTR_1g048610 I 0.688
ERF104 Arabidopsis lyrata fgenesh2_kg.8__2143__AT5G61600.1 I 0.688
Thhalv10005566m.g Eutrema salsugineum Thhalv10005566m.g I 0.687
Carubv10027677m.g Capsella rubella Carubv10027677m.g I 0.687
Cagra.3782s0035 Capsella grandiflora Cagra.3782s0035 I 0.687
TCM_014847 Theobroma cacao TCM_014847 I 0.687
PRUPE_ppa008915mg Prunus persica PRUPE_ppa008915mg I 0.687
Pm019545 Prunus mume Pm019545 I 0.687
CM0905.90.nd Lotus japonicus CM0905.90.nd I 0.686
Ciclev10005570m.g Citrus clementina Ciclev10005570m.g I 0.686
PRUPE_ppa023698mg Prunus persica PRUPE_ppa023698mg I 0.686
Pm017698 Prunus mume Pm017698 I 0.686
MDP0000180950 Malus domestica MDP0000180950 I 0.686
orange1.1g023209m.g Citrus sinensis orange1.1g023209m.g I 0.686
GLYMA20G16910 Glycine max GLYMA20G16910 I 0.685
PK05014.1 Cannabis sativa PK05014.1 I 0.685
GLYMA10G23440 Glycine max GLYMA10G23440 I 0.685
gene21166-v1.0-hybrid Fragaria vesca gene21166-v1.0-hybrid I 0.684
MDP0000122665 Malus domestica MDP0000122665 I 0.684
MDP0000135205 Malus domestica MDP0000135205 I 0.684
SapurV1A.1065s0030 Salix purpurea SapurV1A.1065s0030 I 0.684
PGSC0003DMG400026046 Solanum tuberosum PGSC0003DMG400026046 I 0.683
Lus10032498.g Linum usitatissimum Lus10032498.g I 0.683
PGSC0003DMG400026049 Solanum tuberosum PGSC0003DMG400026049 I 0.682
Bostr.25993s0288 Boechera stricta Bostr.25993s0288 I 0.682
cassava4507.m1 Manihot esculenta cassava4507.m1 I 0.681
VIT_16s0013g00950 Vitis vinifera VIT_16s0013g00950 I 0.681
Bra012938 Brassica rapa Bra012938 I 0.681
VIT_16s0013g00980 Vitis vinifera VIT_16s0013g00980 I 0.681
Eucgr.K00126 Eucalyptus grandis Eucgr.K00126 I 0.681
Bo7g098860 Brassica oleracea Bo7g098860 I 0.681
Gorai.008G214000 Gossypium raimondii Gorai.008G214000 I 0.680
Gorai.003G112200 Gossypium raimondii Gorai.003G112200 I 0.680
VIT_16s0013g00970 Vitis vinifera VIT_16s0013g00970 I 0.680
Thhalv10014591m.g Eutrema salsugineum Thhalv10014591m.g I 0.680
PRUPE_ppa025748mg Prunus persica PRUPE_ppa025748mg I 0.679
Bra035732 Brassica rapa Bra035732 I 0.679
POPTR_0003s15040 Populus trichocarpa POPTR_0003s15040 I 0.679
POPTR_0001s11780 Populus trichocarpa POPTR_0001s11780 I 0.679
POPTR_0003s07850 Populus trichocarpa POPTR_0003s07850 I 0.679
SapurV1A.0059s0640 Salix purpurea SapurV1A.0059s0640 I 0.679
Pm017700 Prunus mume Pm017700 I 0.679
Bo9g100030 Brassica oleracea Bo9g100030 I 0.679
Lus10042995.g Linum usitatissimum Lus10042995.g I 0.678
TCM_005704 Theobroma cacao TCM_005704 I 0.678
ERF104 Arabidopsis thaliana AT5G61600 D 0.678
fgenesh2_kg.8__1005__AT5G51190.1 Arabidopsis lyrata fgenesh2_kg.8__1005__AT5G51190.1 I 0.678
Bo7g077390 Brassica oleracea Bo7g077390 I 0.678
Ciclev10005750m.g Citrus clementina Ciclev10005750m.g I 0.677
orange1.1g026385m.g Citrus sinensis orange1.1g026385m.g I 0.677