CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra032900
(
Brassica rapa
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Bra032900
T001219_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra032900.1-P
AP2
24
75
NRYRGVRKRPRGRYAAEIRDPVQKARVWLGTFDTSEAAARAYDKAAVAFRGA
Links
Other
AP2
family TFs
Other
Brassica rapa
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g143350
Brassica oleracea
Bo3g143350
I
0.686
Bra010880
Brassica rapa
Bra010880
I
0.686
Bo7g048170
Brassica oleracea
Bo7g048170
I
0.684
Bra030095
Brassica rapa
Bra030095
I
0.684
OPUNC04G22340
Oryza punctata
OPUNC04G22340
I
0.679
ONIVA04G24000
Oryza nivara
ONIVA04G24000
I
0.679
ORGLA04G0219400
Oryza glaberrima
ORGLA04G0219400
I
0.679
ORUFI04G26530
Oryza rufipogon
ORUFI04G26530
I
0.679
OS04G0610400
Oryza sativa
OS04G0610400
I
0.679
OMERI04G20480
Oryza meridionalis
OMERI04G20480
I
0.679
OGLUM04G24780
Oryza glumaepatula
OGLUM04G24780
I
0.679
Bo1g129710
Brassica oleracea
Bo1g129710
I
0.679
BGIOSGA017088
Oryza indica
BGIOSGA017088
I
0.679
LPERR04G20430
Leersia perrieri
LPERR04G20430
I
0.679
OBART04G25320
Oryza barthii
OBART04G25320
I
0.679
Pavir.Ga00485
Panicum virgatum
Pavir.Ga00485
I
0.677
Si010228m.g
Setaria italica
Si010228m.g
I
0.677
GRMZM2G068967
Zea mays
GRMZM2G068967
I
0.677
Sb06g028090
Sorghum bicolor
Sb06g028090
I
0.677