BRADI3G35560 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI3G35560 T001330_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-4
M01612_2.00
Arabidopsis thaliana
NRCCGHCMNN

NNKGDCGGYN
PBM
Weirauch et al.(2014)
pTH8092
0.845 0.920
ERF055
M06577_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_col_a
0.832 0.900
ERF055
M06578_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a
0.832 0.900
AT5G65130
M06686_2.00
Arabidopsis thaliana
YCDYCDCCRCCGCCN

NGGCGGYGGHGRHGR
Dap-seq
OMalley et al.(2016)
At5g65130_col_a
0.716 0.820
AT5G65130
M06687_2.00
Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW

WKGKCGGYGSHDNNDNNNN
Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a
0.716 0.820
WIN1
M01603_2.00
Arabidopsis thaliana
VCRCCGCNNN

NNNGCGGYGB
PBM
Weirauch et al.(2014)
pTH7566
0.681 0.640
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G35560.1 AP2 96 147

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

448 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA08G37548 Glycine max GLYMA08G37548 N 0.000
MDP0000168881 Malus domestica MDP0000168881 N 0.000
Gorai.011G109400 Gossypium raimondii Gorai.011G109400 N 0.000
gene20707-v1.0-hybrid Fragaria vesca gene20707-v1.0-hybrid N 0.000
evm.TU.supercontig_20.29 Carica papaya evm.TU.supercontig_20.29 N 0.000
evm.TU.supercontig_10.74 Carica papaya evm.TU.supercontig_10.74 N 0.000
Ciclev10024788m.g Citrus clementina Ciclev10024788m.g N 0.000
Cucsa.103870 Cucumis sativus Cucsa.103870 N 0.000
cassava31348.valid.m1 Manihot esculenta cassava31348.valid.m1 N 0.000
cassava12560.valid.m1 Manihot esculenta cassava12560.valid.m1 N 0.000
29235.m000233 Ricinus communis 29235.m000233 N 0.000
Cla014312 Citrullus lanatus Cla014312 N 0.000
VIT_00s0218g00070 Vitis vinifera VIT_00s0218g00070 N 0.000
TCM_000959 Theobroma cacao TCM_000959 N 0.000
orange1.1g001665m.g Citrus sinensis orange1.1g001665m.g N 0.000