BRADI5G24710 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI5G24710 T001384_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.679 0.686
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.679 0.686
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI5G24710.1 AP2 7 58

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr4G02200_001 Musa acuminata GSMUA_Achr4G02200_001 I 0.735
evm.TU.supercontig_10.113 Carica papaya evm.TU.supercontig_10.113 I 0.726
BRADI5G24720 Brachypodium distachyon BRADI5G24720 I 0.721
F775_03622 Aegilops tauschii F775_03622 I 0.710
TRAES3BF176500010CFD_g Triticum aestivum TRAES3BF176500010CFD_g I 0.691
Traes_2AL_61DB73424 Triticum aestivum Traes_2AL_61DB73424 I 0.691
Traes_2BL_5BA37F95E Triticum aestivum Traes_2BL_5BA37F95E I 0.691
MLOC_59305 Hordeum vulgare MLOC_59305 I 0.686
cassava26230.m1 Manihot esculenta cassava26230.m1 I 0.683
Pavir.J12977 Panicum virgatum Pavir.J12977 I 0.681
Si024352m.g Setaria italica Si024352m.g I 0.681
Pavir.Ga00062 Panicum virgatum Pavir.Ga00062 I 0.681
Sb06g031230 Sorghum bicolor Sb06g031230 I 0.681
GRMZM2G104260 Zea mays GRMZM2G104260 I 0.681
Ciclev10026602m.g Citrus clementina Ciclev10026602m.g I 0.679
Ciclev10009593m.g Citrus clementina Ciclev10009593m.g I 0.679
Eucgr.C02719 Eucalyptus grandis Eucgr.C02719 I 0.679
LjSGA_107677.3 Lotus japonicus LjSGA_107677.3 I 0.679
Thhalv10004973m.g Eutrema salsugineum Thhalv10004973m.g I 0.679
Carubv10001796m.g Capsella rubella Carubv10001796m.g I 0.679
Eucgr.F03947 Eucalyptus grandis Eucgr.F03947 I 0.679
Cagra.1945s0014 Capsella grandiflora Cagra.1945s0014 I 0.679
Cucsa.162720 Cucumis sativus Cucsa.162720 I 0.679
Cucsa.162710 Cucumis sativus Cucsa.162710 I 0.679
Cucsa.271720 Cucumis sativus Cucsa.271720 I 0.679
PDK_20s1355821g002 Phoenix dactylifera PDK_20s1355821g002 I 0.679
Bostr.29827s0297 Boechera stricta Bostr.29827s0297 I 0.679
Aquca_016_00154 Aquilegia coerulea Aquca_016_00154 I 0.679
SapurV1A.2028s0010 Salix purpurea SapurV1A.2028s0010 I 0.679
evm.TU.supercontig_127.4 Carica papaya evm.TU.supercontig_127.4 I 0.679
MDP0000297646 Malus domestica MDP0000297646 I 0.679
MDP0000243375 Malus domestica MDP0000243375 I 0.679
orange1.1g029507m.g Citrus sinensis orange1.1g029507m.g I 0.679
orange1.1g030482m.g Citrus sinensis orange1.1g030482m.g I 0.679
SapurV1A.0280s0090 Salix purpurea SapurV1A.0280s0090 I 0.679
SapurV1A.0705s0080 Salix purpurea SapurV1A.0705s0080 I 0.679
MDP0000127054 Malus domestica MDP0000127054 I 0.679
Lus10035859.g Linum usitatissimum Lus10035859.g I 0.679
gene15940-v1.0-hybrid Fragaria vesca gene15940-v1.0-hybrid I 0.679
gene15036-v1.0-hybrid Fragaria vesca gene15036-v1.0-hybrid I 0.679
SapurV1A.0730s0010 Salix purpurea SapurV1A.0730s0010 I 0.679
Gorai.001G036500 Gossypium raimondii Gorai.001G036500 I 0.679
Cucsa.105830 Cucumis sativus Cucsa.105830 I 0.679
Gorai.009G060600 Gossypium raimondii Gorai.009G060600 I 0.679
SapurV1A.0835s0060 Salix purpurea SapurV1A.0835s0060 I 0.679
29848.m004566 Ricinus communis 29848.m004566 I 0.679
PGSC0003DMG400028500 Solanum tuberosum PGSC0003DMG400028500 I 0.679
PGSC0003DMG400026136 Solanum tuberosum PGSC0003DMG400026136 I 0.679
MTR_4g008860 Medicago truncatula MTR_4g008860 I 0.679
POPTR_0001s14720 Populus trichocarpa POPTR_0001s14720 I 0.679
POPTR_0003s17830 Populus trichocarpa POPTR_0003s17830 I 0.679
POPTR_0018s02280 Populus trichocarpa POPTR_0018s02280 I 0.679
POPTR_0006s27710 Populus trichocarpa POPTR_0006s27710 I 0.679
GLYMA15G00660 Glycine max GLYMA15G00660 I 0.679
GLYMA13G44660 Glycine max GLYMA13G44660 I 0.679
Bo7g096180 Brassica oleracea Bo7g096180 I 0.679
Bo2g158960 Brassica oleracea Bo2g158960 I 0.679
Bra009824 Brassica rapa Bra009824 I 0.679
Bra020490 Brassica rapa Bra020490 I 0.679
GLYMA07G02930 Glycine max GLYMA07G02930 I 0.679
fgenesh2_kg.6__2505__AT5G25190.1 Arabidopsis lyrata fgenesh2_kg.6__2505__AT5G25190.1 I 0.679
PRUPE_ppa011795mg Prunus persica PRUPE_ppa011795mg I 0.679
SELMODRAFT_121842 Selaginella moellendorffii SELMODRAFT_121842 I 0.679
Pm005717 Prunus mume Pm005717 I 0.679
Cla022694 Citrullus lanatus Cla022694 I 0.679
Cla021320 Citrullus lanatus Cla021320 I 0.679
ERF003 Arabidopsis thaliana AT5G25190 D 0.679
cassava20662.m1 Manihot esculenta cassava20662.m1 I 0.679
cassava38444.m1 Manihot esculenta cassava38444.m1 I 0.679
cassava38443.m1 Manihot esculenta cassava38443.m1 I 0.679
Cla015579 Citrullus lanatus Cla015579 I 0.679
VIT_09s0002g09140 Vitis vinifera VIT_09s0002g09140 I 0.679
Solyc06g065820.2 Solanum lycopersicum Solyc06g065820.2 I 0.679
SELMODRAFT_92334 Selaginella moellendorffii SELMODRAFT_92334 I 0.679
Solyc06g068360.2 Solanum lycopersicum Solyc06g068360.2 I 0.679
TCM_036933 Theobroma cacao TCM_036933 I 0.679
VIT_09s0002g09120 Vitis vinifera VIT_09s0002g09120 I 0.679
VIT_04s0008g06000 Vitis vinifera VIT_04s0008g06000 I 0.679
cassava8560.m1 Manihot esculenta cassava8560.m1 I 0.679