GLYMA16G27040 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA16G27040 T001996_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN

NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.734 0.922
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND

HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.734 0.922
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA16G27040.1 AP2 33 84

Links

Other AP2 family TFs
Other Glycine max TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.734
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.734
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.734
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.730
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.697
mgf023693m Mimulus guttatus mgf023693m I 0.688
mgf022810m Mimulus guttatus mgf022810m I 0.688
mgf022665m Mimulus guttatus mgf022665m I 0.731
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.721
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.734
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.734
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.699
Ciclev10018044m.g Citrus clementina Ciclev10018044m.g I 0.722
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.722
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.701
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.730
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.721
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.682
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.702
cassava9887.m1 Manihot esculenta cassava9887.m1 I 0.785
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.699
Ca_08232 Cicer arietinum Ca_08232 I 0.734
Ca_10494 Cicer arietinum Ca_10494 I 0.699
Cla010474 Citrullus lanatus Cla010474 I 0.702
Cla012318 Citrullus lanatus Cla012318 I 0.721
Pm000004 Prunus mume Pm000004 I 0.684
Pm015931 Prunus mume Pm015931 I 0.699
Pm025326 Prunus mume Pm025326 I 0.734
29635.m000461 Ricinus communis 29635.m000461 I 0.699
29813.m001543 Ricinus communis 29813.m001543 I 0.701
30084.m000185 Ricinus communis 30084.m000185 I 0.734
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.702
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.727
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.701
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.695
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.725
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.699
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.734
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.699
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.722
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.701
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.699
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.730
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.725
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.702
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.702
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.702
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.702
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.702
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.708
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.699
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.734
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.725
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.734
PK13330.1 Cannabis sativa PK13330.1 I 0.699
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.722
MDP0000551969 Malus domestica MDP0000551969 I 0.699
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.731
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.720
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.699
Gorai.013G115000 Gossypium raimondii Gorai.013G115000 I 0.687
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.734
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.702
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.722
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.702
Lus10013614.g Linum usitatissimum Lus10013614.g I 0.677
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.689
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.697
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.697
MDP0000172804 Malus domestica MDP0000172804 I 0.708
MDP0000177547 Malus domestica MDP0000177547 I 0.734
MDP0000276536 Malus domestica MDP0000276536 I 0.699
MDP0000525933 Malus domestica MDP0000525933 I 0.684
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.734
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.733
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.699
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.735
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.735
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.683
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.699
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.699
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.697
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.734
OBART07G06690 Oryza barthii OBART07G06690 I 0.735
OBART12G17080 Oryza barthii OBART12G17080 I 0.699
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.735
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.699
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.735
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.699
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.735
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.699
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.699
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.702
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.735
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.699
Bo2g018360 Brassica oleracea Bo2g018360 I 0.734
Bo3g013830 Brassica oleracea Bo3g013830 I 0.734
Bo9g152440 Brassica oleracea Bo9g152440 I 0.734
Bra002262 Brassica rapa Bra002262 I 0.734
Bra006518 Brassica rapa Bra006518 I 0.734
Bra020063 Brassica rapa Bra020063 I 0.734
F775_02727 Aegilops tauschii F775_02727 I 0.699
GLYMA02G08020 Glycine max GLYMA02G08020 I 0.797
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.699
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.734
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.708
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.699
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.699
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.734
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.730
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.699
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.732
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.699
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.734
SELMODRAFT_17708 Selaginella moellendorffii SELMODRAFT_17708 I 0.705
SELMODRAFT_28575 Selaginella moellendorffii SELMODRAFT_28575 I 0.705
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.681
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.681
Si024417m.g Setaria italica Si024417m.g I 0.702
Si033237m.g Setaria italica Si033237m.g I 0.732
Si038848m.g Setaria italica Si038848m.g I 0.699
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.679
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.706
TCM_018659 Theobroma cacao TCM_018659 I 0.699
TCM_025913 Theobroma cacao TCM_025913 I 0.734
TCM_040015 Theobroma cacao TCM_040015 I 0.735
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.699
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.702
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.684
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.699
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.735
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.699
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.735
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.699
OS07G0204000 Oryza sativa OS07G0204000 I 0.735
OS12G0582900 Oryza sativa OS12G0582900 I 0.699
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.699
OB07G15030 Oryza brachyantha OB07G15030 I 0.735
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.708
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.734
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.734
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.693
POPTR_0013s05330 Populus trichocarpa POPTR_0013s05330 I 0.746
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.699
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.734
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.687
PGSC0003DMG400008352 Solanum tuberosum PGSC0003DMG400008352 N 0.679