MTR_8g023680 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_8g023680 T002957_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CRF2
M01622_2.00 		Arabidopsis thaliana
SCGCCGCC
GGCGGCGS		 PBM
Weirauch et al.(2014)
pTH8680 		0.700 0.604
LOC_Os08g36920
M01634_2.00 		Oryza sativa
NNNGSCGHNN
NNDCGSCNNN		 PBM
Weirauch et al.(2014)
pTH8596 		0.699 0.646
EREBP1
M09708_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EREBP1_01 		0.683 0.604
ERF10
M06562_2.00 		Arabidopsis thaliana
NNHNNHNHHDYCGCCGCCRYN
NRYGGCGGCGRHDDNDNNDNN		 Dap-seq
OMalley et al.(2016)
ERF10_col_a 		0.682 0.562
ERF10
M06563_2.00 		Arabidopsis thaliana
HDSCGCCGCCRHHDNNNNNN
NNNNNNHDDYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF10_colamp_a 		0.682 0.562
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AET01967 AP2 114 164

Links

Other AP2 family TFs
Other Medicago truncatula TFs

244 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_1g028560 Medicago truncatula MTR_1g028560 I 0.739
Ca_13084 Cicer arietinum Ca_13084 I 0.726
GSMUA_Achr7G18930_001 Musa acuminata GSMUA_Achr7G18930_001 I 0.718
30115.m001193 Ricinus communis 30115.m001193 I 0.717
MTR_1g105400 Medicago truncatula MTR_1g105400 N 0.714
evm.TU.supercontig_2.277 Carica papaya evm.TU.supercontig_2.277 I 0.708
Lus10032353.g Linum usitatissimum Lus10032353.g I 0.707
Lus10033938.g Linum usitatissimum Lus10033938.g I 0.707
Eucgr.I01153 Eucalyptus grandis Eucgr.I01153 I 0.705
Sb07g023030 Sorghum bicolor Sb07g023030 I 0.704
GRMZM2G369472 Zea mays GRMZM2G369472 I 0.704
Bra019270 Brassica rapa Bra019270 I 0.704
Eucgr.B00720 Eucalyptus grandis Eucgr.B00720 I 0.704
Bo7g109100 Brassica oleracea Bo7g109100 I 0.704
Bra013730 Brassica rapa Bra013730 I 0.704
Bo1g037170 Brassica oleracea Bo1g037170 I 0.704
MTR_4g086190 Medicago truncatula MTR_4g086190 I 0.703
MTR_4g086165 Medicago truncatula MTR_4g086165 I 0.703
MTR_4g086160 Medicago truncatula MTR_4g086160 I 0.703
Si014237m.g Setaria italica Si014237m.g I 0.702
Cla011108 Citrullus lanatus Cla011108 I 0.702
gw1.259.19.1 Physcomitrella patens gw1.259.19.1 I 0.702
Cucsa.107190 Cucumis sativus Cucsa.107190 I 0.702
LjSGA_008718.1 Lotus japonicus LjSGA_008718.1 I 0.702
Carubv10005160m.g Capsella rubella Carubv10005160m.g I 0.702
SapurV1A.0035s0790 Salix purpurea SapurV1A.0035s0790 I 0.702
Bostr.7867s0178 Boechera stricta Bostr.7867s0178 I 0.702
CRF2 Arabidopsis thaliana AT4G23750 D 0.702
BRADI3G38140 Brachypodium distachyon BRADI3G38140 I 0.702
CRF2 Arabidopsis lyrata fgenesh2_kg.7__1924__AT4G23750.1 I 0.702
Cagra.1226s0039 Capsella grandiflora Cagra.1226s0039 I 0.702
Thhalv10026857m.g Eutrema salsugineum Thhalv10026857m.g I 0.700
GSMUA_Achr8G08000_001 Musa acuminata GSMUA_Achr8G08000_001 I 0.700
Gorai.003G082200 Gossypium raimondii Gorai.003G082200 I 0.700
ONIVA08G19930 Oryza nivara ONIVA08G19930 I 0.699
OS08G0474000 Oryza sativa OS08G0474000 I 0.699
MTR_4g086220 Medicago truncatula MTR_4g086220 I 0.699
OPUNC08G15760 Oryza punctata OPUNC08G15760 I 0.699
OB08G25030 Oryza brachyantha OB08G25030 I 0.699
OGLUM08G18720 Oryza glumaepatula OGLUM08G18720 I 0.699
LOC_Os08g36920 Oryza sativa LOC_Os08g36920 D 0.699
gene24044-v1.0-hybrid Fragaria vesca gene24044-v1.0-hybrid I 0.699
Pavir.Fa00656 Panicum virgatum Pavir.Fa00656 I 0.699
OLONG_013554 Oryza longistaminata OLONG_013554 I 0.699
Thhalv10023946m.g Eutrema salsugineum Thhalv10023946m.g I 0.698
GSMUA_Achr3G06960_001 Musa acuminata GSMUA_Achr3G06960_001 I 0.697
Pavir.J19559 Panicum virgatum Pavir.J19559 I 0.697
SapurV1A.2778s0010 Salix purpurea SapurV1A.2778s0010 I 0.695
Gorai.005G238000 Gossypium raimondii Gorai.005G238000 I 0.695
Gorai.013G043700 Gossypium raimondii Gorai.013G043700 I 0.695
cassava38228.valid.m1 Manihot esculenta cassava38228.valid.m1 I 0.695
Gorai.008G025100 Gossypium raimondii Gorai.008G025100 I 0.695
Sb01g003670 Sorghum bicolor Sb01g003670 I 0.695
TCM_007061 Theobroma cacao TCM_007061 I 0.695
Aquca_013_00162 Aquilegia coerulea Aquca_013_00162 I 0.695
MDP0000890854 Malus domestica MDP0000890854 I 0.695
POPTR_0009s10470 Populus trichocarpa POPTR_0009s10470 I 0.695
SapurV1A.0643s0230 Salix purpurea SapurV1A.0643s0230 I 0.695
Solyc03g005500.1 Solanum lycopersicum Solyc03g005500.1 I 0.695
Ciclev10028930m.g Citrus clementina Ciclev10028930m.g I 0.694
Cla022096 Citrullus lanatus Cla022096 I 0.693
Cucsa.252810 Cucumis sativus Cucsa.252810 I 0.693
gw1.136.88.1 Physcomitrella patens gw1.136.88.1 I 0.693
Pm026408 Prunus mume Pm026408 I 0.693
chr2.CM0060.150.nc Lotus japonicus chr2.CM0060.150.nc I 0.693
evm.TU.supercontig_62.11 Carica papaya evm.TU.supercontig_62.11 I 0.692
PGSC0003DMG400013401 Solanum tuberosum PGSC0003DMG400013401 I 0.692
Gorai.010G236100 Gossypium raimondii Gorai.010G236100 I 0.692
Cucsa.364910 Cucumis sativus Cucsa.364910 I 0.691
Cla002067 Citrullus lanatus Cla002067 I 0.691
e_gw1.31.217.1 Physcomitrella patens e_gw1.31.217.1 I 0.691
Eucgr.A02669 Eucalyptus grandis Eucgr.A02669 I 0.690
GLYMA03G23330 Glycine max GLYMA03G23330 I 0.690
GLYMA16G08683 Glycine max GLYMA16G08683 I 0.690
Ca_06446 Cicer arietinum Ca_06446 I 0.690
Cucsa.201950 Cucumis sativus Cucsa.201950 I 0.690
GSMUA_Achr11G25600_001 Musa acuminata GSMUA_Achr11G25600_001 I 0.690
mgf008137m Mimulus guttatus mgf008137m I 0.689
Lus10008214.g Linum usitatissimum Lus10008214.g I 0.689
MTR_1g074230 Medicago truncatula MTR_1g074230 I 0.689
MDP0000254227 Malus domestica MDP0000254227 I 0.689
Lus10003601.g Linum usitatissimum Lus10003601.g I 0.689
MTR_8g099215 Medicago truncatula MTR_8g099215 I 0.689
MDP0000317932 Malus domestica MDP0000317932 I 0.689
PRUPE_ppa017002mg Prunus persica PRUPE_ppa017002mg I 0.688
AMTR_s00010p00098700 Amborella trichopoda AMTR_s00010p00098700 I 0.688
Lus10039324.g Linum usitatissimum Lus10039324.g I 0.687
TRIUR3_07811 Triticum urartu TRIUR3_07811 I 0.687
OMERI09G10200 Oryza meridionalis OMERI09G10200 I 0.687
Lus10027573.g Linum usitatissimum Lus10027573.g I 0.687
AMTR_s00097p00165740 Amborella trichopoda AMTR_s00097p00165740 I 0.687
OPUNC09G11150 Oryza punctata OPUNC09G11150 I 0.687
OB09G19290 Oryza brachyantha OB09G19290 I 0.687
cassava39307.m1 Manihot esculenta cassava39307.m1 I 0.686
TCM_016396 Theobroma cacao TCM_016396 I 0.686
Cucsa.012850 Cucumis sativus Cucsa.012850 I 0.686
PRUPE_ppa025804mg Prunus persica PRUPE_ppa025804mg I 0.686
POPTR_0003s13610 Populus trichocarpa POPTR_0003s13610 I 0.686
Pm024096 Prunus mume Pm024096 I 0.686
Cucsa.303720 Cucumis sativus Cucsa.303720 I 0.686
Gorai.008G252300 Gossypium raimondii Gorai.008G252300 I 0.686
GLYMA03G41640 Glycine max GLYMA03G41640 I 0.686
cassava12291.valid.m1 Manihot esculenta cassava12291.valid.m1 I 0.686
GLYMA04G41740 Glycine max GLYMA04G41740 I 0.686
GLYMA06G13040 Glycine max GLYMA06G13040 I 0.686
orange1.1g036154m.g Citrus sinensis orange1.1g036154m.g I 0.686
POPTR_0001s10300 Populus trichocarpa POPTR_0001s10300 I 0.686
SapurV1A.0237s0040 Salix purpurea SapurV1A.0237s0040 I 0.686
Gorai.004G135700 Gossypium raimondii Gorai.004G135700 I 0.686
PK16787.1 Cannabis sativa PK16787.1 I 0.686
Cla004291 Citrullus lanatus Cla004291 I 0.686
Cla011573 Citrullus lanatus Cla011573 I 0.686
Ciclev10021073m.g Citrus clementina Ciclev10021073m.g I 0.686
evm.TU.supercontig_122.27 Carica papaya evm.TU.supercontig_122.27 I 0.686
Bra021871 Brassica rapa Bra021871 I 0.685
Bo4g182140 Brassica oleracea Bo4g182140 I 0.685
GSMUA_AchrUn_randomG16100_001 Musa acuminata GSMUA_AchrUn_randomG16100_001 I 0.685
LPERR02G28780 Leersia perrieri LPERR02G28780 I 0.685
MLOC_67996 Hordeum vulgare MLOC_67996 I 0.685
gene08072-v1.0-hybrid Fragaria vesca gene08072-v1.0-hybrid I 0.684
Ciclev10005220m.g Citrus clementina Ciclev10005220m.g I 0.684
POPTR_0012s01260 Populus trichocarpa POPTR_0012s01260 I 0.684
SapurV1A.2151s0020 Salix purpurea SapurV1A.2151s0020 I 0.684
SapurV1A.1043s0120 Salix purpurea SapurV1A.1043s0120 I 0.684
MTR_7g096700 Medicago truncatula MTR_7g096700 I 0.684
SapurV1A.1442s0010 Salix purpurea SapurV1A.1442s0010 I 0.684
OB08G28690 Oryza brachyantha OB08G28690 I 0.684
orange1.1g047455m.g Citrus sinensis orange1.1g047455m.g I 0.684
Cla023722 Citrullus lanatus Cla023722 I 0.683
Gorai.006G200400 Gossypium raimondii Gorai.006G200400 I 0.683
Gorai.008G271200 Gossypium raimondii Gorai.008G271200 I 0.683
Pavir.Aa00281 Panicum virgatum Pavir.Aa00281 I 0.683
Pavir.J04875 Panicum virgatum Pavir.J04875 I 0.683
PK28823.1 Cannabis sativa PK28823.1 I 0.683
evm.TU.supercontig_3.43 Carica papaya evm.TU.supercontig_3.43 I 0.683
Eucgr.K00321 Eucalyptus grandis Eucgr.K00321 I 0.683
cassava7228.valid.m1 Manihot esculenta cassava7228.valid.m1 I 0.683
Cucsa.122930 Cucumis sativus Cucsa.122930 I 0.683
mgf018116m Mimulus guttatus mgf018116m I 0.683
Carubv10001539m.g Capsella rubella Carubv10001539m.g I 0.683
cassava32471.m1 Manihot esculenta cassava32471.m1 I 0.683
Solyc06g051840.1 Solanum lycopersicum Solyc06g051840.1 I 0.683
OMERI06G07210 Oryza meridionalis OMERI06G07210 I 0.683
ONIVA06G06990 Oryza nivara ONIVA06G06990 I 0.683
OMERI02G32980 Oryza meridionalis OMERI02G32980 I 0.683
OLONG_013314 Oryza longistaminata OLONG_013314 I 0.683
OGLUM06G06300 Oryza glumaepatula OGLUM06G06300 I 0.683
OLONG_008836 Oryza longistaminata OLONG_008836 I 0.683
OPUNC02G32270 Oryza punctata OPUNC02G32270 I 0.683
OPUNC06G05780 Oryza punctata OPUNC06G05780 I 0.683
OS06G0194000 Oryza sativa OS06G0194000 I 0.683
PGSC0003DMG400002350 Solanum tuberosum PGSC0003DMG400002350 I 0.683
EREBP1 Oryza sativa OS02G0782700 D 0.683
ORUFI06G06250 Oryza rufipogon ORUFI06G06250 I 0.683
ORGLA02G0302700 Oryza glaberrima ORGLA02G0302700 I 0.683
ORUFI02G36450 Oryza rufipogon ORUFI02G36450 I 0.683
OGLUM02G36100 Oryza glumaepatula OGLUM02G36100 I 0.683
OBART06G06020 Oryza barthii OBART06G06020 I 0.683
GLYMA01G43350 Glycine max GLYMA01G43350 I 0.683
GRMZM2G018398 Zea mays GRMZM2G018398 I 0.683
BRADI3G60120 Brachypodium distachyon BRADI3G60120 I 0.683
BGIOSGA022463 Oryza indica BGIOSGA022463 I 0.683
AMTR_s00010p00099690 Amborella trichopoda AMTR_s00010p00099690 I 0.683
BGIOSGA005480 Oryza indica BGIOSGA005480 I 0.683
GSMUA_Achr2G07300_001 Musa acuminata GSMUA_Achr2G07300_001 I 0.683
GSMUA_Achr3G23710_001 Musa acuminata GSMUA_Achr3G23710_001 I 0.683
OB06G15590 Oryza brachyantha OB06G15590 I 0.683
OBART02G34990 Oryza barthii OBART02G34990 I 0.683
OB02G41790 Oryza brachyantha OB02G41790 I 0.683
LPERR06G05580 Leersia perrieri LPERR06G05580 I 0.683
GSMUA_Achr8G06870_001 Musa acuminata GSMUA_Achr8G06870_001 I 0.683
PGSC0003DMG400036493 Solanum tuberosum PGSC0003DMG400036493 I 0.683
ONIVA02G37060 Oryza nivara ONIVA02G37060 I 0.683
Si017568m.g Setaria italica Si017568m.g I 0.683
VIT_16s0050g02400 Vitis vinifera VIT_16s0050g02400 I 0.683
TCM_015336 Theobroma cacao TCM_015336 I 0.683
Solyc03g007460.1 Solanum lycopersicum Solyc03g007460.1 I 0.683
Si030856m.g Setaria italica Si030856m.g I 0.682
LPERR01G21530 Leersia perrieri LPERR01G21530 I 0.682
MLOC_10225 Hordeum vulgare MLOC_10225 I 0.682
30190.m010791 Ricinus communis 30190.m010791 I 0.682
GLYMA08G02460 Glycine max GLYMA08G02460 I 0.682
Thhalv10029132m.g Eutrema salsugineum Thhalv10029132m.g I 0.682
ERF10 Arabidopsis thaliana AT1G03800 D 0.682
Ca_07755 Cicer arietinum Ca_07755 I 0.682
Bo3g045150 Brassica oleracea Bo3g045150 I 0.682
GLYMA05G37120 Glycine max GLYMA05G37120 I 0.682
BRADI2G45530 Brachypodium distachyon BRADI2G45530 I 0.682
Pm020606 Prunus mume Pm020606 I 0.682
MTR_7g096750 Medicago truncatula MTR_7g096750 I 0.682
PRUPE_ppa023368mg Prunus persica PRUPE_ppa023368mg I 0.682
Bostr.25463s0212 Boechera stricta Bostr.25463s0212 I 0.682
Aquca_037_00045 Aquilegia coerulea Aquca_037_00045 I 0.682
Ciclev10007133m.g Citrus clementina Ciclev10007133m.g I 0.681
MDP0000783818 Malus domestica MDP0000783818 I 0.681
PGSC0003DMG400012305 Solanum tuberosum PGSC0003DMG400012305 I 0.681
GLYMA11G02140 Glycine max GLYMA11G02140 I 0.681
Aquca_005_00139 Aquilegia coerulea Aquca_005_00139 I 0.681
Gorai.006G208200 Gossypium raimondii Gorai.006G208200 I 0.681
orange1.1g047241m.g Citrus sinensis orange1.1g047241m.g I 0.681
MDP0000229285 Malus domestica MDP0000229285 I 0.681
Solyc06g063070.2 Solanum lycopersicum Solyc06g063070.2 I 0.681
Solyc08g081960.1 Solanum lycopersicum Solyc08g081960.1 I 0.681
gene13118-v1.0-hybrid Fragaria vesca gene13118-v1.0-hybrid I 0.681
CRF1 Arabidopsis thaliana AT4G11140 I 0.680
CRF1 Arabidopsis lyrata fgenesh2_kg.6__3086__AT4G11140.1 I 0.680
Gorai.009G147300 Gossypium raimondii Gorai.009G147300 I 0.680
mgf019903m Mimulus guttatus mgf019903m I 0.680
gene18922-v1.0-hybrid Fragaria vesca gene18922-v1.0-hybrid I 0.680
Pm013172 Prunus mume Pm013172 I 0.679
Cla004992 Citrullus lanatus Cla004992 I 0.679
PRUPE_ppa006366mg Prunus persica PRUPE_ppa006366mg I 0.679
POPTR_0003s06930 Populus trichocarpa POPTR_0003s06930 I 0.679
30169.m006542 Ricinus communis 30169.m006542 I 0.679
chr4.CM0227.40.nd Lotus japonicus chr4.CM0227.40.nd I 0.679
Pm019793 Prunus mume Pm019793 I 0.678
POPTR_0004s14840 Populus trichocarpa POPTR_0004s14840 I 0.678
Ca_15022 Cicer arietinum Ca_15022 I 0.678
chr1.CM0295.140.nd Lotus japonicus chr1.CM0295.140.nd I 0.678
PGSC0003DMG400025797 Solanum tuberosum PGSC0003DMG400025797 I 0.678
Solyc01g108240.2 Solanum lycopersicum Solyc01g108240.2 I 0.678
BRADI1G46690 Brachypodium distachyon BRADI1G46690 I 0.678
GLYMA19G44240 Glycine max GLYMA19G44240 I 0.678
PRUPE_ppa023235mg Prunus persica PRUPE_ppa023235mg I 0.678
MTR_3g090760 Medicago truncatula MTR_3g090760 I 0.678
mgf023807m Mimulus guttatus mgf023807m I 0.678
PRUPE_ppa008720mg Prunus persica PRUPE_ppa008720mg I 0.678
Ca_03948 Cicer arietinum Ca_03948 I 0.678
POPTR_0270s00200 Populus trichocarpa POPTR_0270s00200 I 0.678
Pm021321 Prunus mume Pm021321 I 0.678
CRF6 Arabidopsis thaliana AT3G61630 I 0.677
MLOC_69925 Hordeum vulgare MLOC_69925 I 0.677
SELMODRAFT_131245 Selaginella moellendorffii SELMODRAFT_131245 I 0.677
gene07057-v1.0-hybrid Fragaria vesca gene07057-v1.0-hybrid I 0.677
Traes_6AL_DAA2D7F8A Triticum aestivum Traes_6AL_DAA2D7F8A I 0.677
LPERR09G09240 Leersia perrieri LPERR09G09240 I 0.677
TRIUR3_08978 Triticum urartu TRIUR3_08978 I 0.677
GSMUA_Achr6G32030_001 Musa acuminata GSMUA_Achr6G32030_001 I 0.677
F775_31907 Aegilops tauschii F775_31907 I 0.677
SELMODRAFT_28277 Selaginella moellendorffii SELMODRAFT_28277 I 0.677
Traes_6DL_DD82BD107 Triticum aestivum Traes_6DL_DD82BD107 I 0.677
Ca_05485 Cicer arietinum Ca_05485 I 0.677
Traes_6BL_6AEADC565 Triticum aestivum Traes_6BL_6AEADC565 I 0.677
CRF6 Arabidopsis lyrata fgenesh2_kg.5__2643__AT3G61630.1 I 0.677