OBART09G10730 (Oryza barthii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OBART09G10730 T003169_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART09G10730.1 AP2 46 87
OBART09G10730.1 AP2 100 124
OBART09G10730.1 AP2 166 218
OBART09G10730.2 AP2 46 103
OBART09G10730.2 AP2 145 197

Links

Other AP2 family TFs
Other Oryza barthii TFs

283 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29822.m003477 Ricinus communis 29822.m003477 N 0.822
30069.m000440 Ricinus communis 30069.m000440 N 0.855
30114.m000507 Ricinus communis 30114.m000507 N 0.855
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I 0.889
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N 0.876
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.802
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I 0.777
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I 0.872
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I 0.884
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I 0.811
ADAP Arabidopsis thaliana AT1G16060 I 0.857
AT1G79700 Arabidopsis thaliana AT1G79700 I 0.853
WRI1 Arabidopsis thaliana AT3G54320 I 0.853
BGIOSGA017664 Oryza indica BGIOSGA017664 I 0.781
BGIOSGA021927 Oryza indica BGIOSGA021927 N 0.821
BGIOSGA028751 Oryza indica BGIOSGA028751 I 0.852
BGIOSGA030783 Oryza indica BGIOSGA030783 I 0.901
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.808
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.808
Bo5g021520 Brassica oleracea Bo5g021520 N 0.859
Bo6g067950 Brassica oleracea Bo6g067950 I 0.852
Bo6g124080 Brassica oleracea Bo6g124080 N 0.867
Bo8g083590 Brassica oleracea Bo8g083590 I 0.852
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I 0.853
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I 0.862
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N 0.864
Bra003178 Brassica rapa Bra003178 N 0.853
Bra007066 Brassica rapa Bra007066 N 0.853
Bra026082 Brassica rapa Bra026082 I 0.853
Bra035137 Brassica rapa Bra035137 I 0.861
BRADI1G64240 Brachypodium distachyon BRADI1G64240 I 0.677
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I 0.794
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N 0.825
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.777
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I 0.892
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I 0.803
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I 0.853
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I 0.837
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N 0.826
Carubv10010918m.g Capsella rubella Carubv10010918m.g N 0.855
Carubv10018845m.g Capsella rubella Carubv10018845m.g I 0.853
Carubv10020688m.g Capsella rubella Carubv10020688m.g N 0.859
cassava11368.m1 Manihot esculenta cassava11368.m1 N 0.822
cassava16315.m1 Manihot esculenta cassava16315.m1 N 0.854
cassava39084.m1 Manihot esculenta cassava39084.m1 I 0.811
Ca_03306 Cicer arietinum Ca_03306 N 0.856
Ca_10533 Cicer arietinum Ca_10533 N 0.817
Ca_17532 Cicer arietinum Ca_17532 N 0.876
Ca_20689 Cicer arietinum Ca_20689 N 0.837
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N 0.804
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N 0.803
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N 0.895
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N 0.853
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N 0.895
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N 0.824
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I 0.872
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N 0.781
Cla015555 Citrullus lanatus Cla015555 N 0.886
Cla017294 Citrullus lanatus Cla017294 N 0.766
Cla019044 Citrullus lanatus Cla019044 N 0.887
Cla020765 Citrullus lanatus Cla020765 N 0.843
Cucsa.106090 Cucumis sativus Cucsa.106090 N 0.883
Cucsa.170790 Cucumis sativus Cucsa.170790 I 0.880
Cucsa.282940 Cucumis sativus Cucsa.282940 N 0.840
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.778
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N 0.870
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I 0.888
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N 0.806
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I 0.809
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N 0.824
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N 0.812
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.836
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I 0.885
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N 0.858
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N 0.733
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.819
F775_02064 Aegilops tauschii F775_02064 N 0.776
F775_02400 Aegilops tauschii F775_02400 I 0.794
F775_06373 Aegilops tauschii F775_06373 N 0.789
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N 0.864
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I 0.862
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N 0.853
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N 0.827
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I 0.808
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N 0.893
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N 0.891
GLYMA02G36880 Glycine max GLYMA02G36880 I 0.869
GLYMA04G24010 Glycine max GLYMA04G24010 N 0.889
GLYMA06G30840 Glycine max GLYMA06G30840 N 0.891
GLYMA07G02380 Glycine max GLYMA07G02380 I 0.881
GLYMA08G23630 Glycine max GLYMA08G23630 I 0.881
GLYMA08G24420 Glycine max GLYMA08G24420 N 0.834
GLYMA08G40831 Glycine max GLYMA08G40831 N 0.826
GLYMA09G37540 Glycine max GLYMA09G37540 N 0.805
GLYMA15G34770 Glycine max GLYMA15G34770 N 0.831
GLYMA17G07860 Glycine max GLYMA17G07860 I 0.869
GLYMA18G16236 Glycine max GLYMA18G16236 N 0.827
GLYMA18G49101 Glycine max GLYMA18G49101 N 0.804
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N 0.846
Gorai.006G025100 Gossypium raimondii Gorai.006G025100 N 0.831
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N 0.790
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I 0.868
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.864
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I 0.845
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N 0.812
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I 0.885
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I 0.817
GRMZM2G073982 Zea mays GRMZM2G073982 N 0.821
GRMZM2G113078 Zea mays GRMZM2G113078 I 0.800
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.849
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.805
GRMZM2G141219 Zea mays GRMZM2G141219 I 0.891
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.813
GRMZM2G451031 Zea mays GRMZM2G451031 N 0.723
GSMUA_Achr1G24940_001 Musa acuminata GSMUA_Achr1G24940_001 I 0.686
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I 0.856
GSMUA_Achr3G32510_001 Musa acuminata GSMUA_Achr3G32510_001 N 0.693
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N 0.882
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.808
LjSGA_030627.1 Lotus japonicus LjSGA_030627.1 N 0.736
LPERR01G30020 Leersia perrieri LPERR01G30020 N 0.708
LPERR05G19870 Leersia perrieri LPERR05G19870 I 0.800
LPERR08G13500 Leersia perrieri LPERR08G13500 N 0.848
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.905
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.796
Lus10001553.g Linum usitatissimum Lus10001553.g N 0.895
Lus10005253.g Linum usitatissimum Lus10005253.g N 0.830
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.812
Lus10013268.g Linum usitatissimum Lus10013268.g N 0.816
Lus10024101.g Linum usitatissimum Lus10024101.g I 0.868
Lus10028880.g Linum usitatissimum Lus10028880.g N 0.813
Lus10030671.g Linum usitatissimum Lus10030671.g N 0.830
Lus10030792.g Linum usitatissimum Lus10030792.g N 0.808
Lus10036719.g Linum usitatissimum Lus10036719.g I 0.810
Lus10037209.g Linum usitatissimum Lus10037209.g I 0.810
Lus10041618.g Linum usitatissimum Lus10041618.g I 0.874
MDP0000133423 Malus domestica MDP0000133423 N 0.891
MDP0000166059 Malus domestica MDP0000166059 N 0.819
MDP0000186581 Malus domestica MDP0000186581 N 0.809
MDP0000206674 Malus domestica MDP0000206674 N 0.797
MDP0000231748 Malus domestica MDP0000231748 N 0.893
MDP0000281784 Malus domestica MDP0000281784 I 0.809
MDP0000297698 Malus domestica MDP0000297698 N 0.809
MDP0000318457 Malus domestica MDP0000318457 N 0.891
mg013664m Mimulus guttatus mg013664m N 0.836
mgf008907m Mimulus guttatus mgf008907m I 0.819
mgf017413m Mimulus guttatus mgf017413m N 0.845
mgf019116m Mimulus guttatus mgf019116m N 0.843
mgf019814m Mimulus guttatus mgf019814m N 0.828
MTR_2g460730 Medicago truncatula MTR_2g460730 N 0.895
MTR_4g007770 Medicago truncatula MTR_4g007770 N 0.878
MTR_4g130270 Medicago truncatula MTR_4g130270 I 0.850
MTR_6g011490 Medicago truncatula MTR_6g011490 N 0.827
MTR_7g009410 Medicago truncatula MTR_7g009410 N 0.801
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.833
MTR_8g044070 Medicago truncatula MTR_8g044070 N 0.842
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.807
OB01G43640 Oryza brachyantha OB01G43640 N 0.717
OB05G31600 Oryza brachyantha OB05G31600 I 0.781
OB08G23780 Oryza brachyantha OB08G23780 N 0.725
OB09G17420 Oryza brachyantha OB09G17420 I 0.901
OB11G11380 Oryza brachyantha OB11G11380 I 0.805
OB12G11690 Oryza brachyantha OB12G11690 I 0.805
OBART06G03040 Oryza barthii OBART06G03040 N 0.821
OBART12G01740 Oryza barthii OBART12G01740 N 0.782
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N 0.848
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I 0.905
OGLUM11G01480 Oryza glumaepatula OGLUM11G01480 N 0.717
OLONG_002862 Oryza longistaminata OLONG_002862 N 0.869
OLONG_014256 Oryza longistaminata OLONG_014256 I 0.781
OMERI01G26790 Oryza meridionalis OMERI01G26790 I 0.800
OMERI06G03270 Oryza meridionalis OMERI06G03270 N 0.788
OMERI08G13500 Oryza meridionalis OMERI08G13500 N 0.848
OMERI09G08520 Oryza meridionalis OMERI09G08520 N 0.905
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.808
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.808
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.808
ONIVA06G03970 Oryza nivara ONIVA06G03970 N 0.821
ONIVA08G17820 Oryza nivara ONIVA08G17820 N 0.848
ONIVA09G10420 Oryza nivara ONIVA09G10420 I 0.901
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.808
OPUNC05G21440 Oryza punctata OPUNC05G21440 I 0.781
OPUNC08G14310 Oryza punctata OPUNC08G14310 N 0.841
OPUNC09G09320 Oryza punctata OPUNC09G09320 N 0.870
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.808
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.808
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I 0.872
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N 0.853
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N 0.824
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N 0.753
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N 0.821
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I 0.852
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I 0.901
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I 0.805
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.808
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N 0.821
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N 0.848
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N 0.905
OS05G0536250 Oryza sativa OS05G0536250 I 0.781
OS06G0145700 Oryza sativa OS06G0145700 N 0.807
OS08G0442400 Oryza sativa OS08G0442400 I 0.852
OS09G0423800 Oryza sativa OS09G0423800 I 0.901
OS12G0126300 Oryza sativa OS12G0126300 I 0.805
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I 0.892
Pavir.Ia03819 Panicum virgatum Pavir.Ia03819 I 0.690
Pavir.J02216 Panicum virgatum Pavir.J02216 I 0.800
Pavir.J08481 Panicum virgatum Pavir.J08481 N 0.736
Pavir.J19507 Panicum virgatum Pavir.J19507 N 0.821
Pavir.J34675 Panicum virgatum Pavir.J34675 I 0.800
Pavir.J34903 Panicum virgatum Pavir.J34903 N 0.736
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N 0.794
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N 0.792
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N 0.812
PK04008.1 Cannabis sativa PK04008.1 I 0.850
PK24809.1 Cannabis sativa PK24809.1 I 0.809
PK26651.1 Cannabis sativa PK26651.1 I 0.876
Pm006561 Prunus mume Pm006561 N 0.796
Pm008629 Prunus mume Pm008629 I 0.885
Pm013856 Prunus mume Pm013856 N 0.894
Pm015843 Prunus mume Pm015843 N 0.786
Pm015847 Prunus mume Pm015847 N 0.799
Pm017032 Prunus mume Pm017032 N 0.853
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I 0.884
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N 0.835
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N 0.828
POPTR_0008s01260 Populus trichocarpa POPTR_0008s01260 N 0.716
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N 0.798
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N 0.800
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N 0.822
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N 0.895
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N 0.894
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.796
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N 0.799
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I 0.885
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N 0.822
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N 0.806
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N 0.775
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I 0.885
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I 0.884
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I 0.884
Sb02g025080 Sorghum bicolor Sb02g025080 I 0.901
Sb03g037750 Sorghum bicolor Sb03g037750 N 0.704
Sb05g001790 Sorghum bicolor Sb05g001790 I 0.849
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.780
Sb09g026800 Sorghum bicolor Sb09g026800 I 0.800
Sb10g003160 Sorghum bicolor Sb10g003160 N 0.821
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N 0.760
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.846
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.810
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N 0.876
Si007857m.g Setaria italica Si007857m.g N 0.824
Si012026m.g Setaria italica Si012026m.g N 0.847
Si013842m.g Setaria italica Si013842m.g N 0.778
Si022186m.g Setaria italica Si022186m.g I 0.800
Si026433m.g Setaria italica Si026433m.g N 0.847
Si030129m.g Setaria italica Si030129m.g I 0.899
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I 0.801
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I 0.877
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N 0.805
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I 0.844
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N 0.862
TCM_011797 Theobroma cacao TCM_011797 N 0.788
TCM_018386 Theobroma cacao TCM_018386 N 0.832
TCM_027569 Theobroma cacao TCM_027569 I 0.886
TCM_038442 Theobroma cacao TCM_038442 N 0.891
TCM_044588 Theobroma cacao TCM_044588 I 0.849
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I 0.857
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N 0.853
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N 0.820
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N 0.759
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N 0.816
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I 0.807
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I 0.894
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I 0.807
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N 0.824
TRIUR3_01982 Triticum urartu TRIUR3_01982 I 0.794
TRIUR3_04644 Triticum urartu TRIUR3_04644 N 0.739
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.817
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N 0.826
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I 0.885
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.869
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.775
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N 0.822