OBART12G04120 (Oryza barthii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OBART12G04120 T003182_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
A4F248_TOBAC
M09725_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF1_01
0.796 0.860
A4F249_TOBAC
M09726_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF2_01
0.791 0.840
ERF113
M01629_2.00
Arabidopsis thaliana
NNGCCGHHNN

NNDDCGGCNN
PBM
Weirauch et al.(2014)
pTH8097
0.758 0.800
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN

NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.753 0.780
AT2G33710
M01613_2.00
Arabidopsis thaliana
NSMGCCGHMN

NKDCGGCKSN
PBM
Weirauch et al.(2014)
pTH7543
0.751 0.820
AT2G33710
M06606_2.00
Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH

DNHDDHDRCGGCGGCGVH
Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a
0.751 0.820
AT2G33710
M06607_2.00
Arabidopsis thaliana
NHDYCKCCGCCGYMD

HKRCGGCGGMGRHDN
Dap-seq
OMalley et al.(2016)
At2g33710_col
0.751 0.820
ERF1A
M00848_2.00
Arabidopsis thaliana
NNNNRNN

NNYNNNN
PBM
Franco-Zorrilla et al.(2014)
ATERF1
0.739 0.800
ERF1A
M00720_2.00
Arabidopsis thaliana
NMGCCRNCN

NGNYGGCKN
PBM
Chang et al.(2013)
pTH7202
0.739 0.800
ERF109
M00849_2.00
Arabidopsis thaliana
NGCCGNHNN

NNDNCGGCN
PBM
Franco-Zorrilla et al.(2014)
RRTF1
0.737 0.760
ERF109
M06653_2.00
Arabidopsis thaliana
CKSCGCCGYHWHHNN

NNDDWDRCGGCGSMG
Dap-seq
OMalley et al.(2016)
RRTF1_col_a
0.737 0.760
ERF109
M06654_2.00
Arabidopsis thaliana
HNNHDSCGCCGYHWTHNNN

NNNDAWDRCGGCGSHDNND
Dap-seq
OMalley et al.(2016)
RRTF1_colamp_a
0.737 0.760
RAP2-6
M00717_2.00
Arabidopsis thaliana
NBGCYGNH

DNCRGCVN
PBM
Chang et al.(2013)
pTH7225
0.737 0.900
RAP2-6
M00841_2.00
Arabidopsis thaliana
NGCCGHHNNN

NNNDDCGGCN
PBM
Franco-Zorrilla et al.(2014)
RAP2.6
0.737 0.900
RAP2-6
M06579_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYMD

HKRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
RAP26_col_a
0.737 0.900
RAP2-6
M06580_2.00
Arabidopsis thaliana
CGCCGY

RCGGCG
Dap-seq
OMalley et al.(2016)
RAP26_colamp_a
0.737 0.900
ERF2
M01631_2.00
Arabidopsis thaliana
NNNGCCGNCN

NGNCGGCNNN
PBM
Weirauch et al.(2014)
pTH8113
0.734 0.800
ERF2
M06672_2.00
Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND

HNRYGGCGGCGRHDRNDDNDD
Dap-seq
OMalley et al.(2016)
ERF2_col_a
0.734 0.800
ERF2
M06673_2.00
Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR

YGGCGGCKSHDNNDNNNNNNN
Dap-seq
OMalley et al.(2016)
ERF2_colamp_a
0.734 0.800
ERF115
M06657_2.00
Arabidopsis thaliana
CCGCCGYMRYHDCCR

YGGHDRYKRCGGCGG
Dap-seq
OMalley et al.(2016)
ERF115_col_a
0.721 0.820
ERF115
M06658_2.00
Arabidopsis thaliana
CKCCGCCGYMRYHDY

RHDRYKRCGGCGGMG
Dap-seq
OMalley et al.(2016)
ERF115_colamp_a
0.721 0.820
RAP2-2
M00719_2.00
Arabidopsis thaliana
NNRBYGNN

NNCRVYNN
PBM
Chang et al.(2013)
pTH7227
0.720 0.760
ERF5
M00721_2.00
Arabidopsis thaliana
NNNGSMRNMN

NKNYKSCNNN
PBM
Chang et al.(2013)
pTH7197
0.711 0.800
ERF5
M06674_2.00
Arabidopsis thaliana
YCDYCKCCGCCGYCD

HGRCGGCGGMGRHGR
Dap-seq
OMalley et al.(2016)
ERF5_col_a
0.711 0.800
ERF5
M06675_2.00
Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN

NNNHDNHDRYGGCGGCGVHDN
Dap-seq
OMalley et al.(2016)
ERF5_colamp_a
0.711 0.800
ERF14
M01045_2.00
Arabidopsis thaliana
NVGCCGNCN

NGNCGGCBN
PBM
Sullivan et al.(2014)
pTH9793
0.708 0.740
ERF095
M06624_2.00
Arabidopsis thaliana
YCDCCGCCGCCRYHD

HDRYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ESE1_col_a
0.701 0.740
ERF095
M06625_2.00
Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH

DRHGGCGGCGGHDRHRRNDR
Dap-seq
OMalley et al.(2016)
ESE1_colamp_a
0.701 0.740
ABR1
M01051_2.00
Arabidopsis thaliana
NYGSCGSCVNN

NNBGSCGSCRN
PBM
Sullivan et al.(2014)
pTH7383
0.700 0.820
ABR1
M06684_2.00
Arabidopsis thaliana
CKCCGCCGYMDHHNYHNHH

DDNDRNDDHKRCGGCGGMG
Dap-seq
OMalley et al.(2016)
ABR1_col_a
0.700 0.820
ABR1
M06685_2.00
Arabidopsis thaliana
HNNHDSCGCCGCMAWHNNNNN

NNNNNDWTKGCGGCGSHDNND
Dap-seq
OMalley et al.(2016)
ABR1_colamp_a
0.700 0.820
ERF10
M06562_2.00
Arabidopsis thaliana
NNHNNHNHHDYCGCCGCCRYN

NRYGGCGGCGRHDDNDNNDNN
Dap-seq
OMalley et al.(2016)
ERF10_col_a
0.699 0.760
ERF10
M06563_2.00
Arabidopsis thaliana
HDSCGCCGCCRHHDNNNNNN

NNNNNNHDDYGGCGGCGSHD
Dap-seq
OMalley et al.(2016)
ERF10_colamp_a
0.699 0.760
ERF7
M01617_2.00
Arabidopsis thaliana
NGCCGNMNNN

NNNKNCGGCN
PBM
Weirauch et al.(2014)
pTH7606
0.698 0.720
ERF7
M06620_2.00
Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD

HGRCGGCGGHGRHRRNRDNDR
Dap-seq
OMalley et al.(2016)
ERF7_col_a
0.698 0.720
ERF7
M06621_2.00
Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH

DYGGCGGCGSHDDNDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF7_colamp_a
0.698 0.720
ERF4
M01616_2.00
Arabidopsis thaliana
VCGCCGCC

GGCGGCGB
PBM
Weirauch et al.(2014)
pTH8156
0.696 0.760
ERF4
M06616_2.00
Arabidopsis thaliana
YCDCCGCCGCCRHHD

HDDYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF4_col_a
0.696 0.760
ERF4
M06617_2.00
Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN

NNHDDYGRCGGCGSNDNNDN
Dap-seq
OMalley et al.(2016)
ERF4_colamp_a
0.696 0.760
CRF3
M01633_2.00
Arabidopsis thaliana
NNGCCRNNN

NNNYGGCNN
PBM
Weirauch et al.(2014)
pTH8110
0.696 0.700
Q7Y1W2_TOBAC
M09735_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CEF1_01
0.695 0.740
O65242_TOBAC
M09730_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TSI1_01
0.695 0.660
CRF2
M01622_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8680
0.693 0.680
RAP2-12
M01046_2.00
Arabidopsis thaliana
RSMGBMNNNN

NNNNKVCKSY
PBM
Sullivan et al.(2014)
pTH7359
0.689 0.760
RAP2-12
M06588_2.00
Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN

NDNNNDHDDYGGCGGCGGHDN
Dap-seq
OMalley et al.(2016)
RAP212_col_a
0.689 0.760
ERF9
M06670_2.00
Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN

NDRHDRHDDHGRCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF9_col_a
0.689 0.740
ERF9
M06671_2.00
Arabidopsis thaliana
NNHDSCGCCGYCRHWDN

NHWDYGRCGGCGSHDNN
Dap-seq
OMalley et al.(2016)
ERF9_colamp_a
0.689 0.740
PK19363.1
M01100_2.00
Cannabis sativa
NMGCCGHMNN

NNKDCGGCKN
PBM
Lambert et al.(2019)
pTH10138
0.689 0.720
PK19363.1
M01643_2.00
Cannabis sativa
CGCCGYCD

HGRCGGCG
PBM
Weirauch et al.(2014)
pTH9609
0.689 0.720
ERF2_TOBAC
M09727_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF2_01
0.688 0.740
EREBP1
M09708_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EREBP1_01
0.686 0.700
ERF5_TOBAC
M09729_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF4_02
0.686 0.740
ERF106
M01628_2.00
Arabidopsis thaliana
NNNVCRVCN

NGBYGBNNN
PBM
Weirauch et al.(2014)
pTH7426
0.685 0.680
ERF4_TOBAC
M09728_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_02
0.682 0.720
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART12G04120.1 AP2 48 99

Links

Other AP2 family TFs
Other Oryza barthii TFs

1531 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R012398 Calypte anna Aan_R012398 I 0.000
Afo_R003629 Aptenodytes forsteri Afo_R003629 I 0.000
Alligator_sinensis_CCG005176.1 Alligator sinensis Alligator_sinensis_CCG005176.1 I 0.000
Brh_R002139 Buceros rhinoceros Brh_R002139 I 0.000
Cmyd_10009373 Chelonia mydas Cmyd_10009373 I 0.000
ENSAMEG00000019054 Ailuropoda melanoleuca ENSAMEG00000019054 I 0.000
ENSAMXG00000024924 Astyanax mexicanus ENSAMXG00000024924 I 0.000
ENSAMXG00000025528 Astyanax mexicanus ENSAMXG00000025528 I 0.000
ENSAPLG00000002204 Anas platyrhynchos ENSAPLG00000002204 I 0.000
ENSBTAP00000023618-D1 Bos grunniens ENSBTAP00000023618-D1 I 0.000
ENSCPOG00000010552 Cavia porcellus ENSCPOG00000010552 I 0.000
ENSCSAG00000018511 Chlorocebus sabaeus ENSCSAG00000018511 I 0.000
ENSDNOG00000045269 Dasypus novemcinctus ENSDNOG00000045269 I 0.000
ENSFALG00000014613 Ficedula albicollis ENSFALG00000014613 I 0.000
ENSGACG00000006400 Gasterosteus aculeatus ENSGACG00000006400 I 0.000
ENSGMOG00000008894 Gadus morhua ENSGMOG00000008894 I 0.000
ENSLAFG00000017043 Loxodonta africana ENSLAFG00000017043 I 0.000
ENSLOCG00000008217 Lepisosteus oculatus ENSLOCG00000008217 I 0.000
ENSLOCG00000018299 Lepisosteus oculatus ENSLOCG00000018299 I 0.000
ENSMPUG00000019999 Mustela putorius furo ENSMPUG00000019999 I 0.000
ENSNLEG00000018673 Nomascus leucogenys ENSNLEG00000018673 I 0.000
ENSOARG00000003352 Ovis aries ENSOARG00000003352 I 0.000
ENSONIG00000018891 Oreochromis niloticus ENSONIG00000018891 I 0.000
ENSONIG00000021308 Oreochromis niloticus ENSONIG00000021308 I 0.000
ENSORLG00000016478 Oryzias latipes ENSORLG00000016478 I 0.000
ENSP00000297689 Macaca fascicularis ENSP00000297689 I 0.000
ENSPANG00000006675 Papio anubis ENSPANG00000006675 I 0.000
ENSPFOG00000023063 Poecilia formosa ENSPFOG00000023063 I 0.000
ENSPPYG00000019368 Pongo abelii ENSPPYG00000019368 I 0.000
ENSPSIG00000011205 Pelodiscus sinensis ENSPSIG00000011205 I 0.000
ENSSHAG00000008103 Sarcophilus harrisii ENSSHAG00000008103 I 0.000
ENSSTOG00000028188 Ictidomys tridecemlineatus ENSSTOG00000028188 I 0.000
ENSTNIG00000008333 Tetraodon nigroviridis ENSTNIG00000008333 I 0.000
ENSXMAG00000019943 Xiphophorus maculatus ENSXMAG00000019943 I 0.000
Gfo_R004089 Geospiza fortis Gfo_R004089 I 0.000
Myotis_brandtii_NFIL3_10016869 Myotis brandtii Myotis_brandtii_NFIL3_10016869 I 0.000
NFIL3 Sus scrofa ENSSSCG00000009592 I 0.000
NFIL3 Taeniopygia guttata ENSTGUG00000000417 I 0.000
NFIL3 Tupaia belangeri ENSTBEG00000000787 I 0.000
nfil3 Xenopus tropicalis XB-GENE-479624 I 0.000
Nfil3 Rattus norvegicus ENSRNOG00000011668 I 0.000
NFIL3 Pteropus vampyrus ENSPVAG00000004801 I 0.000
NFIL3 Pan troglodytes ENSPTRG00000021100 I 0.000
NFIL3 Bos taurus ENSBTAG00000017763 I 0.000
NFIL3 Canis familiaris ENSCAFG00000002169 I 0.000
NFIL3 Choloepus hoffmanni ENSCHOG00000006006 I 0.000
NFIL3 Callithrix jacchus ENSCJAG00000005728 I 0.000
nfil3 Danio rerio ENSDARG00000042977 I 0.000
NFIL3 Felis catus ENSFCAG00000013483 I 0.000
NFIL3 Homo sapiens ENSG00000165030 D 0.000
NFIL3 Anolis carolinensis ENSACAG00000000915 I 0.000
NFIL3 Gallus gallus ENSGALG00000015209 I 0.000
NFIL3 Gorilla gorilla ENSGGOG00000001317 I 0.000
NFIL3 Otolemur garnettii ENSOGAG00000011750 I 0.000
NFIL3 Oryctolagus cuniculus ENSOCUG00000000145 I 0.000
Nfil3 Mus musculus ENSMUSG00000056749 D 0.000
NFIL3 Monodelphis domestica ENSMODG00000025436 I 0.000
NFIL3 Macaca mulatta ENSMMUG00000023257 I 0.000
NFIL3 Myotis lucifugus ENSMLUG00000010449 I 0.000
NFIL3 Meleagris gallopavo ENSMGAG00000016056 I 0.000
nfil3.L Xenopus laevis XB-GENE-865288 I 0.000
Ogr15166 Ophisaurus gracilis Ogr15166 I 0.000
Pvit_13069 Pogona vitticeps Pvit_13069 I 0.000
Tal_R002924 Tyto alba Tal_R002924 I 0.000