OGLUM09G17420 (Oryza glumaepatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OGLUM09G17420 T003313_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q8GZQ2_MAIZE
M09720_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1A_02
0.688 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM09G17420.1 AP2 45 98

Links

Other AP2 family TFs
Other Oryza glumaepatula TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Q8GZQ2_MAIZE Zea mays Q8GZQ2_MAIZE D 0.688
DREB1H Oryza indica BGIOSGA029416 I 0.842
ONIVA09G17890 Oryza nivara ONIVA09G17890 I 0.842
OPUNC09G15280 Oryza punctata OPUNC09G15280 I 0.836
Si031001m.g Setaria italica Si031001m.g I 0.683
ORGLA09G0133100 Oryza glaberrima ORGLA09G0133100 I 0.842
Si030869m.g Setaria italica Si030869m.g I 0.701
ORUFI09G18200 Oryza rufipogon ORUFI09G18200 I 0.842
DREB1H Oryza sativa OS09G0522100 I 0.842
Sb02g030310 Sorghum bicolor Sb02g030310 I 0.722
Sb02g030320 Sorghum bicolor Sb02g030320 I 0.683
OMERI09G12480 Oryza meridionalis OMERI09G12480 I 0.836
MLOC_74460 Hordeum vulgare MLOC_74460 I 0.719
LPERR09G12950 Leersia perrieri LPERR09G12950 I 0.690
Pavir.J27101 Panicum virgatum Pavir.J27101 I 0.683
BRADI4G35580 Brachypodium distachyon BRADI4G35580 I 0.719
BRADI4G35630 Brachypodium distachyon BRADI4G35630 I 0.766
BRADI4G35650 Brachypodium distachyon BRADI4G35650 I 0.692
Traes_5BL_60510E4A7 Triticum aestivum Traes_5BL_60510E4A7 I 0.719
GRMZM2G069082 Zea mays GRMZM2G069082 I 0.687
GRMZM2G069146 Zea mays GRMZM2G069146 I 0.689
GRMZM2G124037 Zea mays GRMZM2G124037 I 0.692
Sb02g030330 Sorghum bicolor Sb02g030330 I 0.677
Traes_5BL_5299B6B33 Triticum aestivum Traes_5BL_5299B6B33 N 0.721
Pavir.Fa00114 Panicum virgatum Pavir.Fa00114 N 0.695
Traes_5BL_0C3609EF0 Triticum aestivum Traes_5BL_0C3609EF0 N 0.731
Sb07g025210 Sorghum bicolor Sb07g025210 N 0.700
ORUFI09G18190 Oryza rufipogon ORUFI09G18190 N 0.690
ORGLA09G0133000 Oryza glaberrima ORGLA09G0133000 N 0.690
ONIVA09G17880 Oryza nivara ONIVA09G17880 N 0.690
GRMZM2G175856 Zea mays GRMZM2G175856 N 0.701
F775_18881 Aegilops tauschii F775_18881 N 0.706
BRADI4G35570 Brachypodium distachyon BRADI4G35570 N 0.704
DREB1B Oryza indica BGIOSGA029417 N 0.690
Pavir.J32829 Panicum virgatum Pavir.J32829 N 0.701