CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM11G01480
(
Oryza glumaepatula
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OGLUM11G01480
T003322_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM11G01480.1
AP2
78
136
SIYRGVTRHRWTGRFEAHLWDKNCSTSLQNKKKGRQGAYDSEEAAARAYDLAALKYWGP
OGLUM11G01480.1
AP2
178
216
SKYRGVARHHHNGRWEARIGRVLGNKYLYLGTFGCYFEQ
Links
Other
AP2
family TFs
Other
Oryza glumaepatula
TFs
212 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB09G17420
Oryza brachyantha
OB09G17420
I
0.707
Sb05g001790
Sorghum bicolor
Sb05g001790
I
0.729
Si030129m.g
Setaria italica
Si030129m.g
I
0.709
Solyc01g096860.1
Solanum lycopersicum
Solyc01g096860.1
I
0.709
Solyc03g117720.2
Solanum lycopersicum
Solyc03g117720.2
I
0.698
Solyc06g068570.2
Solanum lycopersicum
Solyc06g068570.2
I
0.685
TCM_027569
Theobroma cacao
TCM_027569
I
0.697
TCM_044588
Theobroma cacao
TCM_044588
I
0.709
Traes_5AL_F8DEBE8E7
Triticum aestivum
Traes_5AL_F8DEBE8E7
I
0.731
Traes_5BL_B6C71B544
Triticum aestivum
Traes_5BL_B6C71B544
I
0.707
Traes_5DL_2CF55DD05
Triticum aestivum
Traes_5DL_2CF55DD05
I
0.731
VIT_09s0018g01650
Vitis vinifera
VIT_09s0018g01650
I
0.698
Sb02g025080
Sorghum bicolor
Sb02g025080
I
0.707
PRUPE_ppa023152mg
Prunus persica
PRUPE_ppa023152mg
I
0.698
OB11G11380
Oryza brachyantha
OB11G11380
I
0.734
OB12G11690
Oryza brachyantha
OB12G11690
I
0.734
OGLUM09G11130
Oryza glumaepatula
OGLUM09G11130
I
0.717
ONIVA09G10420
Oryza nivara
ONIVA09G10420
I
0.707
ORGLA08G0142100
Oryza glaberrima
ORGLA08G0142100
I
0.693
ORGLA09G0079700
Oryza glaberrima
ORGLA09G0079700
I
0.707
ORGLA11G0014900
Oryza glaberrima
ORGLA11G0014900
I
0.734
OS08G0442400
Oryza sativa
OS08G0442400
I
0.693
OS09G0423800
Oryza sativa
OS09G0423800
I
0.707
OS12G0126300
Oryza sativa
OS12G0126300
I
0.734
POPTR_0001s03300
Populus trichocarpa
POPTR_0001s03300
I
0.698
Pm008629
Prunus mume
Pm008629
I
0.698
Cucsa.170790
Cucumis sativus
Cucsa.170790
I
0.698
Aquca_016_00348
Aquilegia coerulea
Aquca_016_00348
I
0.693
Gorai.009G122000
Gossypium raimondii
Gorai.009G122000
I
0.714
Gorai.011G225700
Gossypium raimondii
Gorai.011G225700
I
0.705
Gorai.012G098200
Gossypium raimondii
Gorai.012G098200
I
0.698
Lus10041618.g
Linum usitatissimum
Lus10041618.g
I
0.695
orange1.1g018990m.g
Citrus sinensis
orange1.1g018990m.g
I
0.703
Pavir.Bb02213
Panicum virgatum
Pavir.Bb02213
I
0.709
SapurV1A.0153s0330
Salix purpurea
SapurV1A.0153s0330
I
0.698
SapurV1A.1535s0040
Salix purpurea
SapurV1A.1535s0040
I
0.698
SapurV1A.1603s0090
Salix purpurea
SapurV1A.1603s0090
I
0.698
Thhalv10008118m.g
Eutrema salsugineum
Thhalv10008118m.g
I
0.686
PK04008.1
Cannabis sativa
PK04008.1
I
0.702
Gorai.009G008800
Gossypium raimondii
Gorai.009G008800
I
0.682
evm.TU.supercontig_199.10
Carica papaya
evm.TU.supercontig_199.10
I
0.698
Aquca_048_00034
Aquilegia coerulea
Aquca_048_00034
I
0.698
Bostr.0697s0045
Boechera stricta
Bostr.0697s0045
I
0.709
Bostr.20129s0410
Boechera stricta
Bostr.20129s0410
I
0.692
Cagra.0562s0024
Capsella grandiflora
Cagra.0562s0024
I
0.709
Cagra.1725s0044
Capsella grandiflora
Cagra.1725s0044
I
0.687
Carubv10018845m.g
Capsella rubella
Carubv10018845m.g
I
0.709
Lus10024101.g
Linum usitatissimum
Lus10024101.g
I
0.691
Ciclev10025985m.g
Citrus clementina
Ciclev10025985m.g
I
0.703
Eucgr.B03412
Eucalyptus grandis
Eucgr.B03412
I
0.689
Eucgr.F03987
Eucalyptus grandis
Eucgr.F03987
I
0.702
Eucgr.J00316
Eucalyptus grandis
Eucgr.J00316
I
0.733
PK26651.1
Cannabis sativa
PK26651.1
I
0.692
WRI1
Arabidopsis thaliana
AT3G54320
I
0.709
GLYMA17G07860
Glycine max
GLYMA17G07860
I
0.700
GRMZM2G141219
Zea mays
GRMZM2G141219
I
0.714
Bo6g067950
Brassica oleracea
Bo6g067950
I
0.709
BGIOSGA028751
Oryza indica
BGIOSGA028751
I
0.693
GRMZM2G124524
Zea mays
GRMZM2G124524
I
0.770
BGIOSGA030783
Oryza indica
BGIOSGA030783
I
0.707
fgenesh2_kg.2__2276__AT1G79700.2
Arabidopsis lyrata
fgenesh2_kg.2__2276__AT1G79700.2
I
0.690
Bra035137
Brassica rapa
Bra035137
I
0.692
GSMUA_Achr8G09350_001
Musa acuminata
GSMUA_Achr8G09350_001
I
0.723
BRADI4G30617
Brachypodium distachyon
BRADI4G30617
I
0.709
Bra026082
Brassica rapa
Bra026082
I
0.682
GRMZM2G174834
Zea mays
GRMZM2G174834
I
0.760
GLYMA08G23630
Glycine max
GLYMA08G23630
I
0.732
GLYMA07G02380
Glycine max
GLYMA07G02380
I
0.701
Bo8g083590
Brassica oleracea
Bo8g083590
I
0.709
AMTR_s00019p00086450
Amborella trichopoda
AMTR_s00019p00086450
I
0.699
GSMUA_Achr3G03630_001
Musa acuminata
GSMUA_Achr3G03630_001
I
0.702
BRADI4G43877
Brachypodium distachyon
BRADI4G43877
I
0.731
GLYMA02G36880
Glycine max
GLYMA02G36880
I
0.700
ADAP
Arabidopsis thaliana
AT1G16060
I
0.686
AT1G79700
Arabidopsis thaliana
AT1G79700
I
0.684
MTR_4g130270
Medicago truncatula
MTR_4g130270
I
0.678
Ciclev10033673m.g
Citrus clementina
Ciclev10033673m.g
N
0.696
Gorai.012G056300
Gossypium raimondii
Gorai.012G056300
N
0.697
Ciclev10010237m.g
Citrus clementina
Ciclev10010237m.g
N
0.715
Eucgr.C00238
Eucalyptus grandis
Eucgr.C00238
N
0.689
Bra007066
Brassica rapa
Bra007066
N
0.738
Bra003178
Brassica rapa
Bra003178
N
0.739
BRADI2G48130
Brachypodium distachyon
BRADI2G48130
N
0.677
Carubv10020688m.g
Capsella rubella
Carubv10020688m.g
N
0.695
BRADI3G36820
Brachypodium distachyon
BRADI3G36820
N
0.737
30114.m000507
Ricinus communis
30114.m000507
N
0.680
cassava11368.m1
Manihot esculenta
cassava11368.m1
N
0.699
cassava16315.m1
Manihot esculenta
cassava16315.m1
N
0.733
Cucsa.282940
Cucumis sativus
Cucsa.282940
N
0.703
e_gw1.261.8.1
Physcomitrella patens
e_gw1.261.8.1
N
0.695
e_gw1.32.189.1
Physcomitrella patens
e_gw1.32.189.1
N
0.729
mg013664m
Mimulus guttatus
mg013664m
N
0.713
mgf019116m
Mimulus guttatus
mgf019116m
N
0.735
mgf019814m
Mimulus guttatus
mgf019814m
N
0.713
WRI1
Arabidopsis lyrata
fgenesh2_kg.5__1822__AT3G54320.1
N
0.739
ADAP
Arabidopsis lyrata
fgenesh2_kg.1__1760__AT1G16060.1
N
0.698
F775_06373
Aegilops tauschii
F775_06373
N
0.737
Bostr.7128s0222
Boechera stricta
Bostr.7128s0222
N
0.698
Cucsa.106090
Cucumis sativus
Cucsa.106090
N
0.707
Carubv10010918m.g
Capsella rubella
Carubv10010918m.g
N
0.689
30069.m000440
Ricinus communis
30069.m000440
N
0.734
evm.TU.contig_28586.3
Carica papaya
evm.TU.contig_28586.3
N
0.679
MDP0000133423
Malus domestica
MDP0000133423
N
0.711
MDP0000166059
Malus domestica
MDP0000166059
N
0.682
MDP0000231748
Malus domestica
MDP0000231748
N
0.714
MDP0000318457
Malus domestica
MDP0000318457
N
0.711
orange1.1g036423m.g
Citrus sinensis
orange1.1g036423m.g
N
0.731
Pavir.Fa00925
Panicum virgatum
Pavir.Fa00925
N
0.717
Pavir.J08481
Panicum virgatum
Pavir.J08481
N
0.715
Pavir.J34903
Panicum virgatum
Pavir.J34903
N
0.715
SapurV1A.0036s0830
Salix purpurea
SapurV1A.0036s0830
N
0.702
SapurV1A.0070s0630
Salix purpurea
SapurV1A.0070s0630
N
0.697
LjSGA_030627.1
Lotus japonicus
LjSGA_030627.1
N
0.714
AMTR_s00202p00017170
Amborella trichopoda
AMTR_s00202p00017170
N
0.702
Thhalv10010394m.g
Eutrema salsugineum
Thhalv10010394m.g
N
0.739
AMTR_s00101p00022740
Amborella trichopoda
AMTR_s00101p00022740
N
0.714
chr2.CM0225.20.nc
Lotus japonicus
chr2.CM0225.20.nc
N
0.704
chr2.CM0608.630.nc
Lotus japonicus
chr2.CM0608.630.nc
N
0.699
BGIOSGA034580
Oryza indica
BGIOSGA034580
N
0.812
Lus10030671.g
Linum usitatissimum
Lus10030671.g
N
0.683
evm.TU.supercontig_14.38
Carica papaya
evm.TU.supercontig_14.38
N
0.721
evm.TU.supercontig_54.28
Carica papaya
evm.TU.supercontig_54.28
N
0.740
gene00377-v1.0-hybrid
Fragaria vesca
gene00377-v1.0-hybrid
N
0.728
gene15913-v1.0-hybrid
Fragaria vesca
gene15913-v1.0-hybrid
N
0.715
gene27659-v1.0-hybrid
Fragaria vesca
gene27659-v1.0-hybrid
N
0.711
Gorai.001G256900
Gossypium raimondii
Gorai.001G256900
N
0.724
Gorai.006G025100
Gossypium raimondii
Gorai.006G025100
N
0.713
Gorai.008G182500
Gossypium raimondii
Gorai.008G182500
N
0.686
Bo6g124080
Brassica oleracea
Bo6g124080
N
0.701
Bo5g021520
Brassica oleracea
Bo5g021520
N
0.695
BGIOSGA036704
Oryza indica
BGIOSGA036704
N
0.812
Lus10001553.g
Linum usitatissimum
Lus10001553.g
N
0.715
Lus10005253.g
Linum usitatissimum
Lus10005253.g
N
0.683
Lus10008939.g
Linum usitatissimum
Lus10008939.g
N
0.755
Ciclev10003896m.g
Citrus clementina
Ciclev10003896m.g
N
0.731
Lus10028880.g
Linum usitatissimum
Lus10028880.g
N
0.756
chr6.CM0041.30.nd
Lotus japonicus
chr6.CM0041.30.nd
N
0.715
OB08G23780
Oryza brachyantha
OB08G23780
N
0.705
OPUNC12G01560
Oryza punctata
OPUNC12G01560
N
0.812
MTR_6g011490
Medicago truncatula
MTR_6g011490
N
0.708
MTR_4g007770
Medicago truncatula
MTR_4g007770
N
0.730
ORGLA12G0015400
Oryza glaberrima
ORGLA12G0015400
N
0.812
ORUFI08G18170
Oryza rufipogon
ORUFI08G18170
N
0.724
ORUFI09G11510
Oryza rufipogon
ORUFI09G11510
N
0.717
MTR_2g460730
Medicago truncatula
MTR_2g460730
N
0.715
LPERR12G01610
Leersia perrieri
LPERR12G01610
N
0.797
LPERR09G07570
Leersia perrieri
LPERR09G07570
N
0.720
PGSC0003DMG400027502
Solanum tuberosum
PGSC0003DMG400027502
N
0.742
LPERR08G13500
Leersia perrieri
LPERR08G13500
N
0.724
POPTR_0006s19360
Populus trichocarpa
POPTR_0006s19360
N
0.684
POPTR_0008s01260
Populus trichocarpa
POPTR_0008s01260
N
0.702
POPTR_0010s10290
Populus trichocarpa
POPTR_0010s10290
N
0.694
POPTR_0010s25340
Populus trichocarpa
POPTR_0010s25340
N
0.729
POPTR_0017s11470
Populus trichocarpa
POPTR_0017s11470
N
0.708
OPUNC11G01540
Oryza punctata
OPUNC11G01540
N
0.812
OPUNC09G09320
Oryza punctata
OPUNC09G09320
N
0.684
OPUNC08G14310
Oryza punctata
OPUNC08G14310
N
0.721
OB01G43640
Oryza brachyantha
OB01G43640
N
0.677
MTR_8g468920
Medicago truncatula
MTR_8g468920
N
0.714
MTR_8g044070
Medicago truncatula
MTR_8g044070
N
0.729
OBART09G10730
Oryza barthii
OBART09G10730
N
0.717
OBART12G01740
Oryza barthii
OBART12G01740
N
0.783
OGLUM08G17060
Oryza glumaepatula
OGLUM08G17060
N
0.724
MTR_8g044040
Medicago truncatula
MTR_8g044040
N
0.727
OLONG_002862
Oryza longistaminata
OLONG_002862
N
0.681
OMERI08G13500
Oryza meridionalis
OMERI08G13500
N
0.724
OMERI09G08520
Oryza meridionalis
OMERI09G08520
N
0.717
OMERI11G02080
Oryza meridionalis
OMERI11G02080
N
0.812
OMERI12G00060
Oryza meridionalis
OMERI12G00060
N
0.812
ONIVA03G39530
Oryza nivara
ONIVA03G39530
N
0.812
ONIVA08G17820
Oryza nivara
ONIVA08G17820
N
0.724
MTR_7g009410
Medicago truncatula
MTR_7g009410
N
0.697
ONIVA11G01800
Oryza nivara
ONIVA11G01800
N
0.812
POPTR_0018s11110
Populus trichocarpa
POPTR_0018s11110
N
0.715
PRUPE_ppa007768mg
Prunus persica
PRUPE_ppa007768mg
N
0.714
PRUPE_ppa022243mg
Prunus persica
PRUPE_ppa022243mg
N
0.704
GLYMA06G30840
Glycine max
GLYMA06G30840
N
0.711
VIT_11s0037g00870
Vitis vinifera
VIT_11s0037g00870
N
0.710
WRI1
Vitis vinifera
VIT_13s0047g00340
N
0.688
VIT_14s0108g00050
Vitis vinifera
VIT_14s0108g00050
N
0.708
Ca_03306
Cicer arietinum
Ca_03306
N
0.690
Ca_10533
Cicer arietinum
Ca_10533
N
0.704
Ca_17532
Cicer arietinum
Ca_17532
N
0.732
Ca_20689
Cicer arietinum
Ca_20689
N
0.721
Cla015555
Citrullus lanatus
Cla015555
N
0.709
Cla019044
Citrullus lanatus
Cla019044
N
0.711
Cla020765
Citrullus lanatus
Cla020765
N
0.737
Pm006561
Prunus mume
Pm006561
N
0.704
GLYMA04G24010
Glycine max
GLYMA04G24010
N
0.711
Pm013856
Prunus mume
Pm013856
N
0.714
Pm015847
Prunus mume
Pm015847
N
0.698
Pm017032
Prunus mume
Pm017032
N
0.739
VIT_01s0026g01690
Vitis vinifera
VIT_01s0026g01690
N
0.703
TRIUR3_24036
Triticum urartu
TRIUR3_24036
N
0.767
TRIUR3_04644
Triticum urartu
TRIUR3_04644
N
0.686
PRUPE_ppa022978mg
Prunus persica
PRUPE_ppa022978mg
N
0.698
PRUPE_ppa024318mg
Prunus persica
PRUPE_ppa024318mg
N
0.708
GSMUA_Achr5G04670_001
Musa acuminata
GSMUA_Achr5G04670_001
N
0.702
Sb07g021800
Sorghum bicolor
Sb07g021800
N
0.748
SELMODRAFT_108361
Selaginella moellendorffii
SELMODRAFT_108361
N
0.721
SELMODRAFT_129793
Selaginella moellendorffii
SELMODRAFT_129793
N
0.702
SELMODRAFT_85823
Selaginella moellendorffii
SELMODRAFT_85823
N
0.736
Si012026m.g
Setaria italica
Si012026m.g
N
0.763
Si013842m.g
Setaria italica
Si013842m.g
N
0.734
Si026433m.g
Setaria italica
Si026433m.g
N
0.763
GRMZM2G131266
Zea mays
GRMZM2G131266
N
0.753
Solyc12g010490.1
Solanum lycopersicum
Solyc12g010490.1
N
0.682
TCM_011797
Theobroma cacao
TCM_011797
N
0.696
TCM_038442
Theobroma cacao
TCM_038442
N
0.711
GLYMA15G34770
Glycine max
GLYMA15G34770
N
0.723
GLYMA08G24420
Glycine max
GLYMA08G24420
N
0.726
29822.m003477
Ricinus communis
29822.m003477
N
0.708