OLONG_020978 (Oryza longistaminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OLONG_020978 T003362_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q7Y1W2_TOBAC
M09735_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CEF1_01 		0.739 0.880
EREBP1
M09708_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EREBP1_01 		0.721 0.840
RAP2-2
M00719_2.00 		Arabidopsis thaliana
NNRBYGNN
NNCRVYNN		 PBM
Chang et al.(2013)
pTH7227 		0.714 0.800
A5JTT1_WHEAT
M09700_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_01 		0.706 0.680
Q2TN80_WHEAT
M09715_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_02 		0.699 0.820
RAP2-3
M01050_2.00 		Arabidopsis thaliana
CGCCGCCR
YGGCGGCG		 PBM
Sullivan et al.(2014)
pTH8811 		0.684 0.820
RAP2-3
M00847_2.00 		Arabidopsis thaliana
NMGCCGCCDN
NHGGCGGCKN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.3 		0.684 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_020978-R1 AP2 56 107

Links

Other AP2 family TFs
Other Oryza longistaminata TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART07G22260 Oryza barthii OBART07G22260 I 0.786
ORGLA07G0171300 Oryza glaberrima ORGLA07G0171300 I 0.786
ORUFI07G23290 Oryza rufipogon ORUFI07G23290 I 0.786
OGLUM07G22170 Oryza glumaepatula OGLUM07G22170 I 0.786
OMERI07G18590 Oryza meridionalis OMERI07G18590 I 0.786
ONIVA07G20780 Oryza nivara ONIVA07G20780 I 0.786
OPUNC07G20890 Oryza punctata OPUNC07G20890 I 0.786
BGIOSGA023903 Oryza indica BGIOSGA023903 I 0.786
OS07G0617000 Oryza sativa OS07G0617000 I 0.786
SapurV1A.1115s0040 Salix purpurea SapurV1A.1115s0040 I 0.744
Solyc03g123500.2 Solanum lycopersicum Solyc03g123500.2 I 0.742
Q6TXK7_SOLLC Solanum lycopersicum Q6TXK7_SOLLC I 0.742
Solyc03g118190.2 Solanum lycopersicum Solyc03g118190.2 I 0.739
Q7Y1W2_TOBAC Nicotiana tabacum Q7Y1W2_TOBAC D 0.739
PGSC0003DMG400014240 Solanum tuberosum PGSC0003DMG400014240 I 0.739
PGSC0003DMG400019693 Solanum tuberosum PGSC0003DMG400019693 I 0.739
GSMUA_Achr8G23730_001 Musa acuminata GSMUA_Achr8G23730_001 I 0.735
cassava31610.valid.m1 Manihot esculenta cassava31610.valid.m1 I 0.735
GLYMA19G45200 Glycine max GLYMA19G45200 I 0.735
GLYMA16G01500 Glycine max GLYMA16G01500 I 0.735
Eucgr.I02155 Eucalyptus grandis Eucgr.I02155 I 0.735
cassava31609.valid.m1 Manihot esculenta cassava31609.valid.m1 I 0.735
Cucsa.359880 Cucumis sativus Cucsa.359880 I 0.735
evm.TU.supercontig_481.1 Carica papaya evm.TU.supercontig_481.1 I 0.735
gene05448-v1.0-hybrid Fragaria vesca gene05448-v1.0-hybrid I 0.735
MTR_2g105380 Medicago truncatula MTR_2g105380 I 0.735
GSMUA_Achr9G18090_001 Musa acuminata GSMUA_Achr9G18090_001 I 0.735
27585.m000144 Ricinus communis 27585.m000144 I 0.735
Ca_16180 Cicer arietinum Ca_16180 I 0.735
Cla015763 Citrullus lanatus Cla015763 I 0.735
SapurV1A.1700s0030 Salix purpurea SapurV1A.1700s0030 I 0.735
POPTR_0001s16400 Populus trichocarpa POPTR_0001s16400 I 0.735
TCM_029232 Theobroma cacao TCM_029232 I 0.735
VIT_09s0002g00470 Vitis vinifera VIT_09s0002g00470 I 0.735
GLYMA07G04950 Glycine max GLYMA07G04950 I 0.735
MDP0000403580 Malus domestica MDP0000403580 I 0.735
Gorai.011G056300 Gossypium raimondii Gorai.011G056300 I 0.735
GLYMA03G42450 Glycine max GLYMA03G42450 I 0.735
Lus10013186.g Linum usitatissimum Lus10013186.g I 0.735
GSMUA_Achr3G10140_001 Musa acuminata GSMUA_Achr3G10140_001 I 0.735
MDP0000308922 Malus domestica MDP0000308922 I 0.735
Lus10037448.g Linum usitatissimum Lus10037448.g I 0.735
PGSC0003DMG400009142 Solanum tuberosum PGSC0003DMG400009142 I 0.734
OB07G27820 Oryza brachyantha OB07G27820 I 0.733
PRUPE_ppa006366mg Prunus persica PRUPE_ppa006366mg I 0.731
POPTR_0003s06930 Populus trichocarpa POPTR_0003s06930 I 0.731
Pm013172 Prunus mume Pm013172 I 0.731
Gorai.009G147300 Gossypium raimondii Gorai.009G147300 I 0.731
Aquca_020_00575 Aquilegia coerulea Aquca_020_00575 I 0.730
Eucgr.H04892 Eucalyptus grandis Eucgr.H04892 I 0.730
MTR_8g022820 Medicago truncatula MTR_8g022820 I 0.730
PK15234.1 Cannabis sativa PK15234.1 I 0.730
GSMUA_Achr6G10870_001 Musa acuminata GSMUA_Achr6G10870_001 I 0.730
GSMUA_Achr5G24060_001 Musa acuminata GSMUA_Achr5G24060_001 I 0.729
GSMUA_Achr3G05800_001 Musa acuminata GSMUA_Achr3G05800_001 I 0.728
Cla012751 Citrullus lanatus Cla012751 I 0.727
PGSC0003DMG400004898 Solanum tuberosum PGSC0003DMG400004898 I 0.727
GRMZM2G052667 Zea mays GRMZM2G052667 I 0.726
Eucgr.K02780 Eucalyptus grandis Eucgr.K02780 I 0.725
Eucgr.K02193 Eucalyptus grandis Eucgr.K02193 I 0.725
Solyc04g051360.2 Solanum lycopersicum Solyc04g051360.2 I 0.724
Cucsa.149280 Cucumis sativus Cucsa.149280 I 0.722
OS06G0194000 Oryza sativa OS06G0194000 I 0.721
BGIOSGA022463 Oryza indica BGIOSGA022463 I 0.721
ONIVA02G37060 Oryza nivara ONIVA02G37060 I 0.721
OMERI06G07210 Oryza meridionalis OMERI06G07210 I 0.721
OPUNC06G05780 Oryza punctata OPUNC06G05780 I 0.721
OMERI02G32980 Oryza meridionalis OMERI02G32980 I 0.721
ORUFI06G06250 Oryza rufipogon ORUFI06G06250 I 0.721
EREBP1 Oryza sativa OS02G0782700 D 0.721
ORUFI02G36450 Oryza rufipogon ORUFI02G36450 I 0.721
ORGLA02G0302700 Oryza glaberrima ORGLA02G0302700 I 0.721
BGIOSGA005480 Oryza indica BGIOSGA005480 I 0.721
OPUNC02G32270 Oryza punctata OPUNC02G32270 I 0.721
LPERR06G05580 Leersia perrieri LPERR06G05580 I 0.721
OBART06G06020 Oryza barthii OBART06G06020 I 0.721
OBART02G34990 Oryza barthii OBART02G34990 I 0.721
OB06G15590 Oryza brachyantha OB06G15590 I 0.721
OGLUM02G36100 Oryza glumaepatula OGLUM02G36100 I 0.721
OGLUM06G06300 Oryza glumaepatula OGLUM06G06300 I 0.721
OLONG_008836 Oryza longistaminata OLONG_008836 I 0.721
OB02G41790 Oryza brachyantha OB02G41790 I 0.721
OLONG_013314 Oryza longistaminata OLONG_013314 I 0.721
LPERR02G28780 Leersia perrieri LPERR02G28780 I 0.719
Solyc06g063070.2 Solanum lycopersicum Solyc06g063070.2 I 0.719
Traes_2AS_72E9B68D2 Triticum aestivum Traes_2AS_72E9B68D2 I 0.718
AMTR_s00003p00133970 Amborella trichopoda AMTR_s00003p00133970 I 0.718
Traes_2BS_5E7287209 Triticum aestivum Traes_2BS_5E7287209 I 0.718
MLOC_51143 Hordeum vulgare MLOC_51143 I 0.718
Bra027355 Brassica rapa Bra027355 I 0.715
Bostr.28625s0277 Boechera stricta Bostr.28625s0277 I 0.715
Bra021543 Brassica rapa Bra021543 I 0.715
Bo5g130490 Brassica oleracea Bo5g130490 I 0.715
Carubv10013925m.g Capsella rubella Carubv10013925m.g I 0.715
BRADI3G60120 Brachypodium distachyon BRADI3G60120 I 0.715
Cagra.1582s0005 Capsella grandiflora Cagra.1582s0005 I 0.715
Thhalv10020945m.g Eutrema salsugineum Thhalv10020945m.g I 0.714
RAP2.2 Arabidopsis lyrata scaffold_301660.1 I 0.714
Ciclev10021059m.g Citrus clementina Ciclev10021059m.g I 0.714
RAP2-2 Arabidopsis thaliana AT3G14230 D 0.714
MTR_1g087920 Medicago truncatula MTR_1g087920 I 0.714
orange1.1g019887m.g Citrus sinensis orange1.1g019887m.g I 0.714
GLYMA19G40070 Glycine max GLYMA19G40070 I 0.714
OGLUM09G04680 Oryza glumaepatula OGLUM09G04680 I 0.713
ORUFI09G04400 Oryza rufipogon ORUFI09G04400 I 0.713
ONIVA09G04180 Oryza nivara ONIVA09G04180 I 0.713
BGIOSGA030065 Oryza indica BGIOSGA030065 I 0.713
OPUNC09G03530 Oryza punctata OPUNC09G03530 I 0.713
OS09G0286600 Oryza sativa OS09G0286600 I 0.713
ORGLA09G0030300 Oryza glaberrima ORGLA09G0030300 I 0.713
OMERI09G03020 Oryza meridionalis OMERI09G03020 I 0.713
Eucgr.H01085 Eucalyptus grandis Eucgr.H01085 I 0.712
PK12109.1 Cannabis sativa PK12109.1 I 0.712
TCM_004717 Theobroma cacao TCM_004717 I 0.712
Gorai.004G142800 Gossypium raimondii Gorai.004G142800 I 0.712
Solyc09g075420.2 Solanum lycopersicum Solyc09g075420.2 I 0.712
Gorai.004G051600 Gossypium raimondii Gorai.004G051600 I 0.712
29986.m001656 Ricinus communis 29986.m001656 I 0.712
MDP0000288465 Malus domestica MDP0000288465 I 0.712
SapurV1A.0052s0250 Salix purpurea SapurV1A.0052s0250 I 0.712
mgf021642m Mimulus guttatus mgf021642m I 0.712
Ca_03482 Cicer arietinum Ca_03482 I 0.712
Gorai.010G236100 Gossypium raimondii Gorai.010G236100 I 0.712
cassava24734.valid.m1 Manihot esculenta cassava24734.valid.m1 I 0.712
Ca_03481 Cicer arietinum Ca_03481 I 0.712
gene11086-v1.0-hybrid Fragaria vesca gene11086-v1.0-hybrid I 0.712
PRUPE_ppa008730mg Prunus persica PRUPE_ppa008730mg I 0.712
Q84XB2_SOLLC Solanum lycopersicum Q84XB2_SOLLC I 0.712
GLYMA02G01960 Glycine max GLYMA02G01960 I 0.712
GLYMA10G02080 Glycine max GLYMA10G02080 I 0.712
POPTR_0014s12090 Populus trichocarpa POPTR_0014s12090 I 0.712
PGSC0003DMG400031795 Solanum tuberosum PGSC0003DMG400031795 I 0.712
Cla017662 Citrullus lanatus Cla017662 I 0.710
Cucsa.096930 Cucumis sativus Cucsa.096930 I 0.710
Cla009438 Citrullus lanatus Cla009438 I 0.708
AMTR_s00003p00135920 Amborella trichopoda AMTR_s00003p00135920 I 0.708
Lus10042907.g Linum usitatissimum Lus10042907.g I 0.707
A5JTT1_WHEAT Triticum aestivum A5JTT1_WHEAT D 0.706
Cucsa.069280 Cucumis sativus Cucsa.069280 I 0.705
LjSGA_141699.1 Lotus japonicus LjSGA_141699.1 I 0.705
evm.TU.supercontig_151.30 Carica papaya evm.TU.supercontig_151.30 I 0.704
GSMUA_Achr10G18670_001 Musa acuminata GSMUA_Achr10G18670_001 I 0.702
Cucsa.252810 Cucumis sativus Cucsa.252810 I 0.701
GLYMA07G37410 Glycine max GLYMA07G37410 I 0.700
MLOC_18529 Hordeum vulgare MLOC_18529 I 0.699
TRIUR3_28474 Triticum urartu TRIUR3_28474 I 0.699
Traes_7DS_3570A0055 Triticum aestivum Traes_7DS_3570A0055 I 0.699
Q2TN80_WHEAT Triticum aestivum Q2TN80_WHEAT D 0.699
F775_27248 Aegilops tauschii F775_27248 I 0.699
Si006802m.g Setaria italica Si006802m.g I 0.699
LPERR07G19320 Leersia perrieri LPERR07G19320 I 0.698
GSMUA_Achr3G08180_001 Musa acuminata GSMUA_Achr3G08180_001 I 0.696
SapurV1A.0494s0080 Salix purpurea SapurV1A.0494s0080 I 0.694
Pm020059 Prunus mume Pm020059 I 0.694
AMTR_s00129p00112550 Amborella trichopoda AMTR_s00129p00112550 I 0.694
Bostr.28625s0015 Boechera stricta Bostr.28625s0015 I 0.694
Pavir.J05942 Panicum virgatum Pavir.J05942 I 0.694
POPTR_0002s20270 Populus trichocarpa POPTR_0002s20270 I 0.694
orange1.1g039729m.g Citrus sinensis orange1.1g039729m.g I 0.694
PGSC0003DMG400016003 Solanum tuberosum PGSC0003DMG400016003 I 0.694
GRMZM2G085964 Zea mays GRMZM2G085964 I 0.694
HRE2 Arabidopsis lyrata fgenesh2_kg.4__2993__AT2G47520.1 I 0.693
Sb10g006260 Sorghum bicolor Sb10g006260 I 0.692
GRMZM2G171179 Zea mays GRMZM2G171179 I 0.692
PDK_20s1440861g004 Phoenix dactylifera PDK_20s1440861g004 I 0.691
Carubv10025530m.g Capsella rubella Carubv10025530m.g I 0.691
Cagra.0551s0010 Capsella grandiflora Cagra.0551s0010 I 0.691
TRIUR3_28710 Triticum urartu TRIUR3_28710 I 0.690
BRADI1G46690 Brachypodium distachyon BRADI1G46690 I 0.690
Carubv10014563m.g Capsella rubella Carubv10014563m.g I 0.689
LPERR05G10570 Leersia perrieri LPERR05G10570 I 0.689
Cagra.5497s0009 Capsella grandiflora Cagra.5497s0009 I 0.689
Si023329m.g Setaria italica Si023329m.g I 0.687
Thhalv10021421m.g Eutrema salsugineum Thhalv10021421m.g I 0.686
Bostr.25993s0004 Boechera stricta Bostr.25993s0004 I 0.686
Bra021401 Brassica rapa Bra021401 I 0.685
Sb09g017950 Sorghum bicolor Sb09g017950 I 0.685
GRMZM2G076896 Zea mays GRMZM2G076896 I 0.685
Pavir.Cb01365 Panicum virgatum Pavir.Cb01365 I 0.685
Bo4g198690 Brassica oleracea Bo4g198690 I 0.685
Pavir.J21082 Panicum virgatum Pavir.J21082 I 0.685
Traes_5BL_98D063967 Triticum aestivum Traes_5BL_98D063967 I 0.684
Sb03g012890 Sorghum bicolor Sb03g012890 I 0.684
Traes_5DL_41E3B1B23 Triticum aestivum Traes_5DL_41E3B1B23 I 0.684
Si002845m.g Setaria italica Si002845m.g I 0.684
Solyc01g090300.2 Solanum lycopersicum Solyc01g090300.2 I 0.684
GRMZM2G053503 Zea mays GRMZM2G053503 I 0.684
RAP2-3 Arabidopsis thaliana AT3G16770 D 0.684
Pavir.J08480 Panicum virgatum Pavir.J08480 I 0.684
RAP2.3 Arabidopsis lyrata scaffold_301966.1 I 0.684
MDP0000413387 Malus domestica MDP0000413387 I 0.684
BGIOSGA003364 Oryza indica BGIOSGA003364 I 0.684
Pavir.Eb02324 Panicum virgatum Pavir.Eb02324 I 0.684
BRADI2G11890 Brachypodium distachyon BRADI2G11890 I 0.684
TRAES3BF171600010CFD_g Triticum aestivum TRAES3BF171600010CFD_g I 0.684
ORGLA01G0108600 Oryza glaberrima ORGLA01G0108600 I 0.684
OMERI12G11270 Oryza meridionalis OMERI12G11270 I 0.684
OS01G0313300 Oryza sativa OS01G0313300 I 0.684
OPUNC01G12900 Oryza punctata OPUNC01G12900 I 0.684
GRMZM2G169382 Zea mays GRMZM2G169382 I 0.684
orange1.1g020391m.g Citrus sinensis orange1.1g020391m.g I 0.683
cassava42231.valid.m1 Manihot esculenta cassava42231.valid.m1 I 0.683
cassava42230.valid.m1 Manihot esculenta cassava42230.valid.m1 I 0.683
Ciclev10025816m.g Citrus clementina Ciclev10025816m.g I 0.683
GRMZM2G018984 Zea mays GRMZM2G018984 I 0.682
SELMODRAFT_87463 Selaginella moellendorffii SELMODRAFT_87463 I 0.681
orange1.1g032263m.g Citrus sinensis orange1.1g032263m.g I 0.681
Ciclev10022734m.g Citrus clementina Ciclev10022734m.g I 0.681
Sb02g039300 Sorghum bicolor Sb02g039300 I 0.681
SELMODRAFT_73854 Selaginella moellendorffii SELMODRAFT_73854 I 0.681
BRADI2G27920 Brachypodium distachyon BRADI2G27920 I 0.681
Thhalv10014579m.g Eutrema salsugineum Thhalv10014579m.g I 0.680
OBART01G28650 Oryza barthii OBART01G28650 N 0.680
F775_05346 Aegilops tauschii F775_05346 I 0.680
Pavir.J32835 Panicum virgatum Pavir.J32835 I 0.680
Pavir.J34139 Panicum virgatum Pavir.J34139 I 0.679
Pavir.Ib00526 Panicum virgatum Pavir.Ib00526 I 0.679
Pavir.J26885 Panicum virgatum Pavir.J26885 I 0.679
GSMUA_Achr7G19800_001 Musa acuminata GSMUA_Achr7G19800_001 I 0.678
MLOC_64636 Hordeum vulgare MLOC_64636 I 0.678
OGLUM05G14230 Oryza glumaepatula OGLUM05G14230 I 0.677
Si015420m.g Setaria italica Si015420m.g I 0.677
mgf010035m Mimulus guttatus mgf010035m I 0.677
mgf009667m Mimulus guttatus mgf009667m I 0.677
OPUNC05G11600 Oryza punctata OPUNC05G11600 I 0.677
Bo7g077390 Brassica oleracea Bo7g077390 I 0.677
ORGLA05G0114900 Oryza glaberrima ORGLA05G0114900 I 0.677
ORUFI05G14490 Oryza rufipogon ORUFI05G14490 I 0.677
Solyc05g052040.1 Solanum lycopersicum Solyc05g052040.1 I 0.677
OS05G0361700 Oryza sativa OS05G0361700 I 0.677
OB05G21350 Oryza brachyantha OB05G21350 I 0.677
ONIVA05G14090 Oryza nivara ONIVA05G14090 I 0.677
BGIOSGA019701 Oryza indica BGIOSGA019701 I 0.677