ORGLA08G0220100 (Oryza glaberrima)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORGLA08G0220100 T003942_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q8GZQ2_MAIZE
M09720_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1A_02
0.781 0.868
DREB1A
M09710_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1A_01
0.772 0.849
DREB1A
M09711_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SED_Q2
0.772 0.849
Q8W236_WHEAT
M09724_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF1_02
0.695 0.679
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA08G0220100.1 AP2 53 106

Links

Other AP2 family TFs
Other Oryza glaberrima TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_27111 Aegilops tauschii F775_27111 I 0.758
BRADI1G77120 Brachypodium distachyon BRADI1G77120 N 0.686
BRADI4G35610 Brachypodium distachyon BRADI4G35610 I 0.686
BRADI4G35650 Brachypodium distachyon BRADI4G35650 I 0.804
LPERR09G12950 Leersia perrieri LPERR09G12950 I 0.831
OBART09G16830 Oryza barthii OBART09G16830 I 0.743
OBART09G16810 Oryza barthii OBART09G16810 I 0.772
ORGLA08G0220200 Oryza glaberrima ORGLA08G0220200 N 0.678
OGLUM08G23770 Oryza glumaepatula OGLUM08G23770 N 0.678
OGLUM09G17430 Oryza glumaepatula OGLUM09G17430 I 0.772
BGIOSGA026544 Oryza indica BGIOSGA026544 N 0.678
DREB1A Oryza indica BGIOSGA029415 I 0.772
OMERI09G12490 Oryza meridionalis OMERI09G12490 I 0.772
ONIVA09G17900 Oryza nivara ONIVA09G17900 I 0.772
OPUNC09G15290 Oryza punctata OPUNC09G15290 I 0.772
OPUNC09G15260 Oryza punctata OPUNC09G15260 I 0.774
ORUFI09G18210 Oryza rufipogon ORUFI09G18210 I 0.772
DREB1A Oryza sativa OS09G0522200 D 0.772
Pavir.Ba01280 Panicum virgatum Pavir.Ba01280 I 0.772
Pavir.Ba01281 Panicum virgatum Pavir.Ba01281 I 0.847
Pavir.Fa00114 Panicum virgatum Pavir.Fa00114 N 0.742
Pavir.Fb02246 Panicum virgatum Pavir.Fb02246 I 0.790
Pavir.J27101 Panicum virgatum Pavir.J27101 I 0.818
Pavir.J03893 Panicum virgatum Pavir.J03893 I 0.841
Pavir.J03892 Panicum virgatum Pavir.J03892 I 0.839
Pavir.J03891 Panicum virgatum Pavir.J03891 I 0.773
Pavir.J32829 Panicum virgatum Pavir.J32829 N 0.734
Si030998m.g Setaria italica Si030998m.g I 0.773
Si031001m.g Setaria italica Si031001m.g I 0.818
Sb07g025210 Sorghum bicolor Sb07g025210 N 0.733
Sb05g006275 Sorghum bicolor Sb05g006275 I 0.809
Sb02g030340 Sorghum bicolor Sb02g030340 I 0.821
Sb02g030330 Sorghum bicolor Sb02g030330 I 0.826
Sb02g030320 Sorghum bicolor Sb02g030320 I 0.818
Traes_5BL_D16B19610 Triticum aestivum Traes_5BL_D16B19610 I 0.758
Q8W236_WHEAT Triticum aestivum Q8W236_WHEAT D 0.695
GRMZM2G124037 Zea mays GRMZM2G124037 I 0.785
GRMZM2G124011 Zea mays GRMZM2G124011 I 0.854
GRMZM2G069146 Zea mays GRMZM2G069146 I 0.817
GRMZM2G069126 Zea mays GRMZM2G069126 I 0.825
GRMZM2G069082 Zea mays GRMZM2G069082 I 0.765
Q8GZQ2_MAIZE Zea mays Q8GZQ2_MAIZE D 0.781
GRMZM2G175856 Zea mays GRMZM2G175856 N 0.734