CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PBANKA_100180
(
Plasmodium berghei
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
PBANKA_100180
T004262_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PFD0200c
M09713_2.00
Plasmodium falciparum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$INO2INO4_01
0.822
0.904
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PBANKA_100180:pep
AP2
737
791
VKIQGLTFDHNQIRWIAYWKNENNKQIQKHFPVCKYGFYKARQLALEFRNSKINE
PBANKA_100180:pep
AP2
1743
1792
PKMKGVHFDIRQKRWCAYGYKKKECFSVYRYGFLAARELAVRSRLNVQKR
Links
Other
AP2
family TFs
Other
Plasmodium berghei
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PCHAS_100270
Plasmodium chabaudi
PCHAS_100270
I
0.927
PY01345
Plasmodium yoelii
PY01345
I
0.927
PVX_001040
Plasmodium vivax
PVX_001040
I
0.885
PKH_031060
Plasmodium knowlesi
PKH_031060
I
0.885
PFD0200c
Plasmodium falciparum
PFD0200c
D
0.822