PGSC0003DMG400002399 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400002399 T004340_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400006170 AP2 77 137
PGSC0003DMT400006170 AP2 179 231

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

282 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_06373 Aegilops tauschii F775_06373 N 0.744
F775_02400 Aegilops tauschii F775_02400 I 0.836
F775_02064 Aegilops tauschii F775_02064 N 0.793
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I 0.819
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N 0.796
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.829
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I 0.813
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I 0.816
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I 0.867
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I 0.899
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N 0.794
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I 0.835
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N 0.793
WRI1 Arabidopsis thaliana AT3G54320 I 0.828
ADAP Arabidopsis thaliana AT1G16060 I 0.819
AT1G79700 Arabidopsis thaliana AT1G79700 I 0.832
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I 0.828
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I 0.836
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N 0.793
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.726
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I 0.778
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I 0.836
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N 0.860
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I 0.828
Bo6g067950 Brassica oleracea Bo6g067950 I 0.828
Bo8g083590 Brassica oleracea Bo8g083590 I 0.828
Bo5g021520 Brassica oleracea Bo5g021520 N 0.795
Bo6g124080 Brassica oleracea Bo6g124080 N 0.809
Bra003178 Brassica rapa Bra003178 N 0.794
Bra035137 Brassica rapa Bra035137 I 0.841
Bra026082 Brassica rapa Bra026082 I 0.822
Bra007066 Brassica rapa Bra007066 N 0.794
PK04008.1 Cannabis sativa PK04008.1 I 0.816
PK24809.1 Cannabis sativa PK24809.1 I 0.900
PK26651.1 Cannabis sativa PK26651.1 I 0.813
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I 0.827
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I 0.828
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N 0.755
Carubv10020688m.g Capsella rubella Carubv10020688m.g N 0.801
Carubv10010918m.g Capsella rubella Carubv10010918m.g N 0.784
Carubv10018845m.g Capsella rubella Carubv10018845m.g I 0.828
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N 0.797
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N 0.843
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.824
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I 0.816
Ca_03306 Cicer arietinum Ca_03306 N 0.782
Ca_10533 Cicer arietinum Ca_10533 N 0.845
Ca_20689 Cicer arietinum Ca_20689 N 0.823
Ca_17532 Cicer arietinum Ca_17532 N 0.789
Cla017294 Citrullus lanatus Cla017294 N 0.842
Cla015555 Citrullus lanatus Cla015555 N 0.788
Cla020765 Citrullus lanatus Cla020765 N 0.782
Cla019044 Citrullus lanatus Cla019044 N 0.793
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N 0.789
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N 0.789
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N 0.814
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I 0.812
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N 0.888
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N 0.888
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I 0.812
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N 0.789
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N 0.786
Cucsa.106090 Cucumis sativus Cucsa.106090 N 0.785
Cucsa.170790 Cucumis sativus Cucsa.170790 I 0.820
Cucsa.282940 Cucumis sativus Cucsa.282940 N 0.810
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N 0.888
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I 0.793
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N 0.870
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I 0.817
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N 0.788
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.846
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I 0.818
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N 0.794
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N 0.762
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N 0.780
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I 0.904
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N 0.789
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N 0.792
GLYMA02G36880 Glycine max GLYMA02G36880 I 0.810
GLYMA04G24010 Glycine max GLYMA04G24010 N 0.790
GLYMA07G02380 Glycine max GLYMA07G02380 I 0.826
GLYMA18G49101 Glycine max GLYMA18G49101 N 0.899
GLYMA08G23630 Glycine max GLYMA08G23630 I 0.826
GLYMA08G24420 Glycine max GLYMA08G24420 N 0.797
GLYMA18G16236 Glycine max GLYMA18G16236 N 0.856
GLYMA06G30840 Glycine max GLYMA06G30840 N 0.789
GLYMA17G07860 Glycine max GLYMA17G07860 I 0.810
GLYMA15G34770 Glycine max GLYMA15G34770 N 0.794
GLYMA09G37540 Glycine max GLYMA09G37540 N 0.902
GLYMA08G40831 Glycine max GLYMA08G40831 N 0.853
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I 0.833
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.812
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N 0.797
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N 0.819
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I 0.819
Gorai.006G025100 Gossypium raimondii Gorai.006G025100 N 0.816
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N 0.826
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I 0.816
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I 0.822
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.792
LPERR05G19870 Leersia perrieri LPERR05G19870 I 0.836
LPERR08G13500 Leersia perrieri LPERR08G13500 N 0.777
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.734
Lus10037209.g Linum usitatissimum Lus10037209.g I 0.884
Lus10036719.g Linum usitatissimum Lus10036719.g I 0.884
Lus10001553.g Linum usitatissimum Lus10001553.g N 0.789
Lus10005253.g Linum usitatissimum Lus10005253.g N 0.881
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.769
Lus10013268.g Linum usitatissimum Lus10013268.g N 0.877
Lus10024101.g Linum usitatissimum Lus10024101.g I 0.820
Lus10041618.g Linum usitatissimum Lus10041618.g I 0.819
Lus10030792.g Linum usitatissimum Lus10030792.g N 0.882
Lus10028880.g Linum usitatissimum Lus10028880.g N 0.766
Lus10030671.g Linum usitatissimum Lus10030671.g N 0.881
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N 0.789
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N 0.814
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N 0.824
MDP0000318457 Malus domestica MDP0000318457 N 0.789
MDP0000133423 Malus domestica MDP0000133423 N 0.789
MDP0000166059 Malus domestica MDP0000166059 N 0.713
MDP0000186581 Malus domestica MDP0000186581 N 0.873
MDP0000231748 Malus domestica MDP0000231748 N 0.792
MDP0000281784 Malus domestica MDP0000281784 I 0.882
MDP0000297698 Malus domestica MDP0000297698 N 0.873
MDP0000206674 Malus domestica MDP0000206674 N 0.890
cassava39084.m1 Manihot esculenta cassava39084.m1 I 0.886
cassava11368.m1 Manihot esculenta cassava11368.m1 N 0.840
cassava16315.m1 Manihot esculenta cassava16315.m1 N 0.800
MTR_4g007770 Medicago truncatula MTR_4g007770 N 0.789
MTR_4g130270 Medicago truncatula MTR_4g130270 I 0.809
MTR_6g011490 Medicago truncatula MTR_6g011490 N 0.836
MTR_7g009410 Medicago truncatula MTR_7g009410 N 0.835
MTR_2g460730 Medicago truncatula MTR_2g460730 N 0.789
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.811
MTR_8g044070 Medicago truncatula MTR_8g044070 N 0.770
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.775
mgf019814m Mimulus guttatus mgf019814m N 0.811
mgf019116m Mimulus guttatus mgf019116m N 0.757
mgf017413m Mimulus guttatus mgf017413m N 0.760
mg013664m Mimulus guttatus mg013664m N 0.800
mgf008907m Mimulus guttatus mgf008907m I 0.808
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N 0.786
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.788
GSMUA_Achr3G32510_001 Musa acuminata GSMUA_Achr3G32510_001 N 0.707
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I 0.827
GSMUA_Achr4G32280_001 Musa acuminata GSMUA_Achr4G32280_001 I 0.683
GSMUA_Achr7G00740_001 Musa acuminata GSMUA_Achr7G00740_001 I 0.687
OBART09G10730 Oryza barthii OBART09G10730 N 0.792
OBART06G03040 Oryza barthii OBART06G03040 N 0.855
OBART12G01740 Oryza barthii OBART12G01740 N 0.733
OB12G11690 Oryza brachyantha OB12G11690 I 0.779
OB11G11380 Oryza brachyantha OB11G11380 I 0.779
OB09G17420 Oryza brachyantha OB09G17420 I 0.822
OB05G31600 Oryza brachyantha OB05G31600 I 0.809
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I 0.814
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I 0.779
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N 0.855
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I 0.822
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.747
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I 0.822
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N 0.777
BGIOSGA030783 Oryza indica BGIOSGA030783 I 0.822
BGIOSGA021927 Oryza indica BGIOSGA021927 N 0.855
BGIOSGA017664 Oryza indica BGIOSGA017664 I 0.797
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.747
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.747
BGIOSGA028751 Oryza indica BGIOSGA028751 I 0.814
OLONG_014256 Oryza longistaminata OLONG_014256 I 0.797
OLONG_002862 Oryza longistaminata OLONG_002862 N 0.793
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.747
OMERI08G13500 Oryza meridionalis OMERI08G13500 N 0.777
OMERI06G03270 Oryza meridionalis OMERI06G03270 N 0.823
OMERI01G26790 Oryza meridionalis OMERI01G26790 I 0.836
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.747
OMERI09G08520 Oryza meridionalis OMERI09G08520 N 0.792
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.747
ONIVA09G10420 Oryza nivara ONIVA09G10420 I 0.822
ONIVA08G17820 Oryza nivara ONIVA08G17820 N 0.777
ONIVA06G03970 Oryza nivara ONIVA06G03970 N 0.855
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.747
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.747
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.747
OPUNC09G09320 Oryza punctata OPUNC09G09320 N 0.780
OPUNC08G14310 Oryza punctata OPUNC08G14310 N 0.774
OPUNC06G02740 Oryza punctata OPUNC06G02740 N 0.697
OPUNC05G21440 Oryza punctata OPUNC05G21440 I 0.797
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N 0.777
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N 0.792
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N 0.855
OS08G0442400 Oryza sativa OS08G0442400 I 0.814
OS05G0536250 Oryza sativa OS05G0536250 I 0.797
OS06G0145700 Oryza sativa OS06G0145700 N 0.830
OS09G0423800 Oryza sativa OS09G0423800 I 0.822
OS12G0126300 Oryza sativa OS12G0126300 I 0.779
Pavir.Bb00216 Panicum virgatum Pavir.Bb00216 I 0.683
Pavir.J02216 Panicum virgatum Pavir.J02216 I 0.836
Pavir.J24038 Panicum virgatum Pavir.J24038 I 0.690
Pavir.Ia00425 Panicum virgatum Pavir.Ia00425 I 0.682
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I 0.828
Pavir.J08481 Panicum virgatum Pavir.J08481 N 0.697
Pavir.J34903 Panicum virgatum Pavir.J34903 N 0.697
Pavir.J34675 Panicum virgatum Pavir.J34675 I 0.836
Pavir.Ba03911 Panicum virgatum Pavir.Ba03911 I 0.691
Pavir.Ia03819 Panicum virgatum Pavir.Ia03819 I 0.681
Pavir.J19507 Panicum virgatum Pavir.J19507 N 0.855
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N 0.840
PDK_20s1726381g002 Phoenix dactylifera PDK_20s1726381g002 N 0.714
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N 0.693
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.771
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N 0.840
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N 0.744
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N 0.827
POPTR_0008s01260 Populus trichocarpa POPTR_0008s01260 N 0.685
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N 0.733
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N 0.784
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I 0.816
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N 0.789
Pm015843 Prunus mume Pm015843 N 0.802
Pm006561 Prunus mume Pm006561 N 0.826
Pm008629 Prunus mume Pm008629 I 0.816
Pm013856 Prunus mume Pm013856 N 0.793
Pm015847 Prunus mume Pm015847 N 0.835
Pm017032 Prunus mume Pm017032 N 0.794
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I 0.816
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N 0.835
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.826
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N 0.793
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N 0.840
29822.m003477 Ricinus communis 29822.m003477 N 0.840
30114.m000507 Ricinus communis 30114.m000507 N 0.784
30069.m000440 Ricinus communis 30069.m000440 N 0.794
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I 0.816
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N 0.784
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N 0.725
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I 0.816
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I 0.816
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N 0.684
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.769
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.753
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N 0.793
Si007857m.g Setaria italica Si007857m.g N 0.858
Si022186m.g Setaria italica Si022186m.g I 0.836
Si026433m.g Setaria italica Si026433m.g N 0.782
Si030129m.g Setaria italica Si030129m.g I 0.822
Si012026m.g Setaria italica Si012026m.g N 0.782
Si013842m.g Setaria italica Si013842m.g N 0.708
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I 0.778
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I 0.823
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N 0.908
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N 0.783
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I 0.803
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N 0.741
Sb05g001790 Sorghum bicolor Sb05g001790 I 0.817
Sb02g025080 Sorghum bicolor Sb02g025080 I 0.822
Sb09g026800 Sorghum bicolor Sb09g026800 I 0.836
Sb10g003160 Sorghum bicolor Sb10g003160 N 0.855
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.714
TCM_011797 Theobroma cacao TCM_011797 N 0.824
TCM_018386 Theobroma cacao TCM_018386 N 0.883
TCM_038442 Theobroma cacao TCM_038442 N 0.789
TCM_044588 Theobroma cacao TCM_044588 I 0.824
TCM_027569 Theobroma cacao TCM_027569 I 0.816
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N 0.788
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I 0.782
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N 0.829
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I 0.828
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I 0.782
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N 0.858
TRIUR3_01982 Triticum urartu TRIUR3_01982 I 0.836
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.755
TRIUR3_04644 Triticum urartu TRIUR3_04644 N 0.713
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I 0.816
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.694
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N 0.834
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.773
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N 0.838
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.779
GRMZM2G141219 Zea mays GRMZM2G141219 I 0.822
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.724
GRMZM2G073982 Zea mays GRMZM2G073982 N 0.855
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.817
GRMZM2G113078 Zea mays GRMZM2G113078 I 0.836