PRUPE_ppa022980mg (Prunus persica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PRUPE_ppa022980mg T004860_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PLT1
M06622_2.00
Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN

NNDYCTYGRDWWNCGTGHH
Dap-seq
OMalley et al.(2016)
PLT1_col_a
0.876 0.856
PLT1
M06623_2.00
Arabidopsis thaliana
DYDCRNWTYYCRAG

CTYGRRAWNYGHRH
Dap-seq
OMalley et al.(2016)
PLT1_colamp_a
0.876 0.856
Q6SA75_TOBAC
M09733_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_01
0.846 0.837
Q6SA75_TOBAC
M09734_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_02
0.846 0.837
ANT
M02647_2.00
Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW

WDNRCHTBGGGAWNYGTGYNH
SELEX
Mathelier et al.(2014)
MA0571.1
0.842 0.837
ANT
M09705_2.00
Arabidopsis thaliana
CACRNWTCCCRAKG

CMTYGGGAWNYGTG
Transfac
Matys et al.(2006)
P$ANT_01
0.842 0.837
AIL7
M06688_2.00
Arabidopsis thaliana
CRNWTHYCRAG

CTYGRDAWNYG
Dap-seq
OMalley et al.(2016)
AIL7_col_a
0.829 0.846
AIL7
M06689_2.00
Arabidopsis thaliana
DCRNWTHYCRAG

CTYGRDAWNYGH
Dap-seq
OMalley et al.(2016)
AIL7_colamp_a
0.829 0.846
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ09047 AP2 349 406
EMJ09047 AP2 448 500

Links

Other AP2 family TFs
Other Prunus persica TFs

525 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bcin02g08940 Botrytis cinerea Bcin02g08940 N 0.000
GGTG_08962 Gaeumannomyces graminis GGTG_08962 I 0.000
MGG_05891 Magnaporthe oryzae MGG_05891 I 0.000
MAPG_04832 Magnaporthe poae MAPG_04832 I 0.000
MAC_00990 Metarhizium acridum MAC_00990 N 0.000
MANI_028841 Metarhizium anisopliae MANI_028841 I 0.000
MBR_08248 Metarhizium brunneum MBR_08248 I 0.000
X797_003538 Metarhizium robertsii X797_003538 I 0.000
estExt_Genewise1.C_41399 Neurospora discreta estExt_Genewise1.C_41399 N 0.000
SU7_1759 Saccharomyces arboricola SU7_1759 I 0.000
12726_YJL089W Saccharomyces bayanus 12726_YJL089W I 0.000
SIP4 Saccharomyces cerevisiae YJL089W D 0.000
SKUD_164001 Saccharomyces kudriavzevii SKUD_164001 I 0.000
11867_YJL089W Saccharomyces mikatae 11867_YJL089W I 0.000
11616_YJL089W Saccharomyces paradoxus 11616_YJL089W I 0.000