SELMODRAFT_105485 (Selaginella moellendorffii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 SELMODRAFT_105485 T005125_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK08602.1
M01098_2.00
Cannabis sativa
NYCACCGCYN

NRGCGGTGRN
PBM
Lambert et al.(2019)
pTH11421
0.764 0.880
DREB2F
M06630_2.00
Arabidopsis thaliana
YCDCCRCCGCY

RGCGGYGGHGR
Dap-seq
OMalley et al.(2016)
AT3G57600_col_a
0.744 0.860
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH

DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.696 0.780
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN

NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.678 0.760
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD

HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.678 0.760
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN

NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.678 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ22448 AP2 17 68

Links

Other AP2 family TFs
Other Selaginella moellendorffii TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.763
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.688
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.764
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.678
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.744
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.696
DREB2F Arabidopsis thaliana AT3G57600 D 0.744
DREB2G Arabidopsis thaliana AT5G18450 D 0.696
DREB2D Arabidopsis thaliana AT1G75490 D 0.678
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.744
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.678
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.696
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.773
Bo8g092010 Brassica oleracea Bo8g092010 I 0.754
Bo9g155940 Brassica oleracea Bo9g155940 I 0.696
Bo6g119660 Brassica oleracea Bo6g119660 I 0.678
Bo6g073020 Brassica oleracea Bo6g073020 I 0.744
Bo4g111040 Brassica oleracea Bo4g111040 I 0.736
Bo2g016490 Brassica oleracea Bo2g016490 I 0.687
Bo6g086320 Brassica oleracea Bo6g086320 I 0.681
Bra023674 Brassica rapa Bra023674 I 0.687
Bra015840 Brassica rapa Bra015840 I 0.678
Bra014617 Brassica rapa Bra014617 I 0.736
Bra007341 Brassica rapa Bra007341 I 0.754
Bra003752 Brassica rapa Bra003752 I 0.681
Bra002159 Brassica rapa Bra002159 I 0.696
PK08602.1 Cannabis sativa PK08602.1 D 0.764
PK07829.1 Cannabis sativa PK07829.1 I 0.680
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.678
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.744
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.700
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.700
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.744
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.678
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.684
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.695
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.780
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.678
Ca_07264 Cicer arietinum Ca_07264 I 0.774
Cla012194 Citrullus lanatus Cla012194 I 0.688
Cla017778 Citrullus lanatus Cla017778 I 0.748
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.774
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.679
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.774
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.679
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.741
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.681
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.773
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.744
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.678
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.696
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.684
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.774
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.771
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.773
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.774
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.774
GLYMA19G04461 Glycine max GLYMA19G04461 I 0.732
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.773
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.768
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.766
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.780
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.780
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I 0.745
MDP0000295902 Malus domestica MDP0000295902 I 0.681
MDP0000871361 Malus domestica MDP0000871361 I 0.768
MDP0000141335 Malus domestica MDP0000141335 I 0.681
MDP0000250927 Malus domestica MDP0000250927 I 0.685
MDP0000703626 Malus domestica MDP0000703626 I 0.768
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.677
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.774
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.679
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.774
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.774
mgf017629m Mimulus guttatus mgf017629m I 0.707
mgf024545m Mimulus guttatus mgf024545m I 0.683
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.680
OBART03G05550 Oryza barthii OBART03G05550 I 0.773
OBART01G04210 Oryza barthii OBART01G04210 I 0.678
OB01G13930 Oryza brachyantha OB01G13930 I 0.678
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.678
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.773
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.678
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.678
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.773
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.678
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.773
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.678
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.773
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.678
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.773
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.678
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.773
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.678
DREB2A Oryza sativa OS01G0165000 I 0.678
DREB2E Oryza sativa OS03G0174400 I 0.773
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.679
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.681
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.773
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.773
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.679
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.680
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.722
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.707
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.774
POPTR_0006s10510 Populus trichocarpa POPTR_0006s10510 I 0.680
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.774
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.679
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.678
Pm025865 Prunus mume Pm025865 I 0.768
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.678
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.768
27810.m000639 Ricinus communis 27810.m000639 I 0.774
30170.m014115 Ricinus communis 30170.m014115 I 0.679
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.773
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.774
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.681
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.825
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.681
Si002067m.g Setaria italica Si002067m.g I 0.688
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.684
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I 0.732
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.696
PGSC0003DMG401015891 Solanum tuberosum PGSC0003DMG401015891 N 0.678
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.774
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.690
TCM_024756 Theobroma cacao TCM_024756 I 0.774
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.773
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.774
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.773
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.773
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.765