Si008385m.g (Setaria italica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Si008385m.g T005255_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF055
M06577_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_col_a
0.779 0.900
ERF055
M06578_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a
0.779 0.900
RAP2-4
M01612_2.00
Arabidopsis thaliana
NRCCGHCMNN

NNKGDCGGYN
PBM
Weirauch et al.(2014)
pTH8092
0.776 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si008385m AP2 172 223

Links

Other AP2 family TFs
Other Setaria italica TFs

431 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
EMBP1_WHEAT Triticum aestivum EMBP1_WHEAT D 0.000
Q40645_ORYSA Oryza sativa Q40645_ORYSA D 0.000
PK09653.1 Cannabis sativa PK09653.1 D 0.000
TAF1_TOBAC Nicotiana tabacum TAF1_TOBAC D 0.000
EmBP-1 Triticum aestivum Traes_5AL_9BC38814C D 0.000
GBF1 Arabidopsis thaliana AT4G36730 D 0.000
GBF3 Arabidopsis thaliana AT2G46270 D 0.000
BZIP16 Arabidopsis thaliana AT2G35530 D 0.000
BZIP68 Arabidopsis thaliana AT1G32150 D 0.000
Q41109_PHAVU Phaseolus vulgaris Q41109_PHAVU D 0.000
Cucsa.258940 Cucumis sativus Cucsa.258940 I 0.000
Cucsa.104970 Cucumis sativus Cucsa.104970 I 0.000
cassava46468.m1 Manihot esculenta cassava46468.m1 I 0.000
cassava45491.m1 Manihot esculenta cassava45491.m1 I 0.000
cassava43571.valid.m1 Manihot esculenta cassava43571.valid.m1 I 0.000
cassava43570.valid.m1 Manihot esculenta cassava43570.valid.m1 I 0.000
cassava43569.valid.m1 Manihot esculenta cassava43569.valid.m1 I 0.000
Cla008988 Citrullus lanatus Cla008988 I 0.000
Cagra.0993s0063 Capsella grandiflora Cagra.0993s0063 I 0.000
Cucsa.312800 Cucumis sativus Cucsa.312800 I 0.000
Cucsa.322110 Cucumis sativus Cucsa.322110 I 0.000
Cagra.0050s0071 Capsella grandiflora Cagra.0050s0071 I 0.000
Bostr.7867s1529 Boechera stricta Bostr.7867s1529 I 0.000
Bostr.3359s0141 Boechera stricta Bostr.3359s0141 I 0.000
Bostr.23794s0549 Boechera stricta Bostr.23794s0549 I 0.000
mgf013423m Mimulus guttatus mgf013423m I 0.000
mgf008605m Mimulus guttatus mgf008605m I 0.000
mgf003302m Mimulus guttatus mgf003302m I 0.000
gw1.33.173.1 Physcomitrella patens gw1.33.173.1 I 0.000
gw1.3.298.1 Physcomitrella patens gw1.3.298.1 I 0.000
gw1.27.125.1 Physcomitrella patens gw1.27.125.1 I 0.000
estExt_fgenesh1_pg.C_10522 Micromonas pusilla estExt_fgenesh1_pg.C_10522 I 0.000
cassava29862.valid.m1 Manihot esculenta cassava29862.valid.m1 I 0.000
cassava29861.valid.m1 Manihot esculenta cassava29861.valid.m1 I 0.000
30174.m008698 Ricinus communis 30174.m008698 I 0.000
VIT_15s0046g01440 Vitis vinifera VIT_15s0046g01440 I 0.000
GBF1 Vitis vinifera VIT_04s0023g01360 I 0.000
VIT_02s0012g02250 Vitis vinifera VIT_02s0012g02250 I 0.000
TRIUR3_31142 Triticum urartu TRIUR3_31142 I 0.000
TRIUR3_18341 Triticum urartu TRIUR3_18341 I 0.000
Traes_7DL_67C4287B2 Triticum aestivum Traes_7DL_67C4287B2 I 0.000
Traes_5DL_75AEE92BB Triticum aestivum Traes_5DL_75AEE92BB I 0.000
Traes_5BL_F3018E8CA Triticum aestivum Traes_5BL_F3018E8CA I 0.000
Traes_2BL_245DDBC7B Triticum aestivum Traes_2BL_245DDBC7B I 0.000
VIT_18s0001g12120 Vitis vinifera VIT_18s0001g12120 I 0.000
Ca_11455 Cicer arietinum Ca_11455 I 0.000
Ca_15839 Cicer arietinum Ca_15839 I 0.000
29646.m001068 Ricinus communis 29646.m001068 I 0.000
PGSC0003DMG400033876 Solanum tuberosum PGSC0003DMG400033876 I 0.000
Pm026586 Prunus mume Pm026586 I 0.000
Pm023132 Prunus mume Pm023132 I 0.000
Pm018422 Prunus mume Pm018422 I 0.000
Cla021500 Citrullus lanatus Cla021500 I 0.000
Cla016502 Citrullus lanatus Cla016502 I 0.000
Cla014415 Citrullus lanatus Cla014415 I 0.000
Ca_17787 Cicer arietinum Ca_17787 I 0.000
Traes_1DL_23D036A85 Triticum aestivum Traes_1DL_23D036A85 I 0.000
Cagra.3359s0011 Capsella grandiflora Cagra.3359s0011 I 0.000
PDK_20s1372692g002 Phoenix dactylifera PDK_20s1372692g002 I 0.000
Pavir.J09275 Panicum virgatum Pavir.J09275 I 0.000
Pavir.J02462 Panicum virgatum Pavir.J02462 I 0.000
Pavir.Ea02315 Panicum virgatum Pavir.Ea02315 I 0.000
Pavir.Ca00968 Panicum virgatum Pavir.Ca00968 I 0.000
Pavir.Bb00931 Panicum virgatum Pavir.Bb00931 I 0.000
Pavir.Ba03287 Panicum virgatum Pavir.Ba03287 I 0.000
orange1.1g036551m.g Citrus sinensis orange1.1g036551m.g I 0.000
orange1.1g018605m.g Citrus sinensis orange1.1g018605m.g I 0.000
MDP0000545420 Malus domestica MDP0000545420 I 0.000
MDP0000493795 Malus domestica MDP0000493795 I 0.000
SapurV1A.0013s0770 Salix purpurea SapurV1A.0013s0770 I 0.000
SapurV1A.0051s0250 Salix purpurea SapurV1A.0051s0250 I 0.000
SapurV1A.0255s0070 Salix purpurea SapurV1A.0255s0070 I 0.000
PDK_20s1368181g001 Phoenix dactylifera PDK_20s1368181g001 I 0.000
PDK_20s1310372g001 Phoenix dactylifera PDK_20s1310372g001 I 0.000
LjSGA_036158.1 Lotus japonicus LjSGA_036158.1 I 0.000
chr2.LjT41P23.50.nc Lotus japonicus chr2.LjT41P23.50.nc I 0.000
chr1.CM0579.280.nd Lotus japonicus chr1.CM0579.280.nd I 0.000
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I 0.000
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I 0.000
Thhalv10007879m.g Eutrema salsugineum Thhalv10007879m.g I 0.000
Thhalv10001533m.g Eutrema salsugineum Thhalv10001533m.g I 0.000
SapurV1A.0817s0110 Salix purpurea SapurV1A.0817s0110 I 0.000
MDP0000286846 Malus domestica MDP0000286846 I 0.000
MDP0000231274 Malus domestica MDP0000231274 I 0.000
MDP0000185553 Malus domestica MDP0000185553 I 0.000
gene13716-v1.0-hybrid Fragaria vesca gene13716-v1.0-hybrid I 0.000
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I 0.000
Eucgr.H01256 Eucalyptus grandis Eucgr.H01256 I 0.000
Eucgr.E00223 Eucalyptus grandis Eucgr.E00223 I 0.000
Eucgr.E00078 Eucalyptus grandis Eucgr.E00078 I 0.000
estExt_fgenesh2_pg.C_Chr_020452 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_020452 I 0.000
Ciclev10025963m.g Citrus clementina Ciclev10025963m.g I 0.000
Ciclev10001333m.g Citrus clementina Ciclev10001333m.g I 0.000
Carubv10023434m.g Capsella rubella Carubv10023434m.g I 0.000
Carubv10005287m.g Capsella rubella Carubv10005287m.g I 0.000
gene29546-v1.0-hybrid Fragaria vesca gene29546-v1.0-hybrid I 0.000
Gorai.003G185700 Gossypium raimondii Gorai.003G185700 I 0.000
Gorai.004G153100 Gossypium raimondii Gorai.004G153100 I 0.000
MDP0000138052 Malus domestica MDP0000138052 I 0.000
Lus10026033.g Linum usitatissimum Lus10026033.g I 0.000
Lus10014324.g Linum usitatissimum Lus10014324.g I 0.000
Lus10005146.g Linum usitatissimum Lus10005146.g I 0.000
Lus10003034.g Linum usitatissimum Lus10003034.g I 0.000
gw2.11.550.1 Micromonas sp RCC299 gw2.11.550.1 I 0.000
Gorai.008G123200 Gossypium raimondii Gorai.008G123200 I 0.000
Gorai.008G068900 Gossypium raimondii Gorai.008G068900 I 0.000
Gorai.007G205700 Gossypium raimondii Gorai.007G205700 I 0.000
Gorai.007G105100 Gossypium raimondii Gorai.007G105100 I 0.000
Cagra.5996s0003 Capsella grandiflora Cagra.5996s0003 I 0.000
OGLUM05G27920 Oryza glumaepatula OGLUM05G27920 I 0.000
LPERR05G21930 Leersia perrieri LPERR05G21930 I 0.000
LPERR03G32540 Leersia perrieri LPERR03G32540 I 0.000
LPERR01G21580 Leersia perrieri LPERR01G21580 I 0.000
GSMUA_Achr6G00170_001 Musa acuminata GSMUA_Achr6G00170_001 I 0.000
GSMUA_Achr4G33130_001 Musa acuminata GSMUA_Achr4G33130_001 I 0.000
GRMZM5G884349 Zea mays GRMZM5G884349 I 0.000
GRMZM2G171370 Zea mays GRMZM2G171370 I 0.000
GRMZM2G117851 Zea mays GRMZM2G117851 I 0.000
GRMZM2G095078 Zea mays GRMZM2G095078 I 0.000
GLYMA16G25600 Glycine max GLYMA16G25600 I 0.000
LPERR07G06120 Leersia perrieri LPERR07G06120 I 0.000
MLOC_6711 Hordeum vulgare MLOC_6711 I 0.000
MLOC_79342 Hordeum vulgare MLOC_79342 I 0.000
OGLUM01G29060 Oryza glumaepatula OGLUM01G29060 I 0.000
OBART07G07070 Oryza barthii OBART07G07070 I 0.000
OBART05G26280 Oryza barthii OBART05G26280 I 0.000
OBART01G25300 Oryza barthii OBART01G25300 I 0.000
OB07G15280 Oryza brachyantha OB07G15280 I 0.000
OB05G33790 Oryza brachyantha OB05G33790 I 0.000
OB01G34490 Oryza brachyantha OB01G34490 I 0.000
MTR_8g077950 Medicago truncatula MTR_8g077950 I 0.000
MTR_8g070820 Medicago truncatula MTR_8g070820 I 0.000
MTR_5g028850 Medicago truncatula MTR_5g028850 I 0.000
GLYMA16G15810 Glycine max GLYMA16G15810 I 0.000
GLYMA16G03190 Glycine max GLYMA16G03190 I 0.000
GLYMA09G34170 Glycine max GLYMA09G34170 I 0.000
Bra010572 Brassica rapa Bra010572 I 0.000
Bra005335 Brassica rapa Bra005335 I 0.000
Bra004550 Brassica rapa Bra004550 I 0.000
Bo4g038560 Brassica oleracea Bo4g038560 I 0.000
Bo4g010410 Brassica oleracea Bo4g010410 I 0.000
Bo1g005460 Brassica oleracea Bo1g005460 I 0.000
BGIOSGA025382 Oryza indica BGIOSGA025382 I 0.000
BGIOSGA013793 Oryza indica BGIOSGA013793 I 0.000
BGIOSGA001085 Oryza indica BGIOSGA001085 I 0.000
AMTR_s00059p00094730 Amborella trichopoda AMTR_s00059p00094730 I 0.000
Bra011701 Brassica rapa Bra011701 I 0.000
BRADI1G04510 Brachypodium distachyon BRADI1G04510 I 0.000
BRADI1G54180 Brachypodium distachyon BRADI1G54180 I 0.000
GLYMA08G34280 Glycine max GLYMA08G34280 I 0.000
GLYMA07G06620 Glycine max GLYMA07G06620 I 0.000
GLYMA02G06550 Glycine max GLYMA02G06550 I 0.000
GLYMA01G01740 Glycine max GLYMA01G01740 I 0.000
bZIP68 Arabidopsis lyrata fgenesh2_kg.1__3350__AT1G32150.1 I 0.000
GBF3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002338 I 0.000
F775_14728 Aegilops tauschii F775_14728 I 0.000
F775_07803 Aegilops tauschii F775_07803 I 0.000
BRADI2G45567 Brachypodium distachyon BRADI2G45567 I 0.000
BRADI2G15940 Brachypodium distachyon BRADI2G15940 I 0.000
AMTR_s00048p00108400 Amborella trichopoda AMTR_s00048p00108400 I 0.000
Traes_1BL_C5FEAF06E Triticum aestivum Traes_1BL_C5FEAF06E I 0.000
SELMODRAFT_129391 Selaginella moellendorffii SELMODRAFT_129391 I 0.000
SELMODRAFT_125734 Selaginella moellendorffii SELMODRAFT_125734 I 0.000
GBF1 Arabidopsis lyrata scaffold_700433.1 I 0.000
Sb09g028990 Sorghum bicolor Sb09g028990 I 0.000
Sb03g030050 Sorghum bicolor Sb03g030050 I 0.000
Sb02g006350 Sorghum bicolor Sb02g006350 I 0.000
Sb01g004080 Sorghum bicolor Sb01g004080 I 0.000
PRUPE_ppa008024mg Prunus persica PRUPE_ppa008024mg I 0.000
PRUPE_ppa006484mg Prunus persica PRUPE_ppa006484mg I 0.000
PRUPE_ppa006173mg Prunus persica PRUPE_ppa006173mg I 0.000
SELMODRAFT_135978 Selaginella moellendorffii SELMODRAFT_135978 I 0.000
SELMODRAFT_38592 Selaginella moellendorffii SELMODRAFT_38592 I 0.000
SELMODRAFT_38594 Selaginella moellendorffii SELMODRAFT_38594 I 0.000
Traes_1AL_F18EC96DF Triticum aestivum Traes_1AL_F18EC96DF I 0.000
TCM_005210 Theobroma cacao TCM_005210 I 0.000
TCM_000436 Theobroma cacao TCM_000436 I 0.000
Solyc05g050220.2 Solanum lycopersicum Solyc05g050220.2 I 0.000
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I 0.000
Solyc02g062950.2 Solanum lycopersicum Solyc02g062950.2 I 0.000
Solyc01g095460.2 Solanum lycopersicum Solyc01g095460.2 I 0.000
Si030123m.g Setaria italica Si030123m.g I 0.000
Si022388m.g Setaria italica Si022388m.g I 0.000
Si001929m.g Setaria italica Si001929m.g I 0.000
POPTR_0014s08990 Populus trichocarpa POPTR_0014s08990 I 0.000
POPTR_0007s12460 Populus trichocarpa POPTR_0007s12460 I 0.000
POPTR_0005s12750 Populus trichocarpa POPTR_0005s12750 I 0.000
OPUNC01G25140 Oryza punctata OPUNC01G25140 I 0.000
ONIVA07G05320 Oryza nivara ONIVA07G05320 I 0.000
ONIVA01G28540 Oryza nivara ONIVA01G28540 I 0.000
OMERI07G05820 Oryza meridionalis OMERI07G05820 I 0.000
OMERI06G11100 Oryza meridionalis OMERI06G11100 I 0.000
OMERI03G30340 Oryza meridionalis OMERI03G30340 I 0.000
OMERI01G23000 Oryza meridionalis OMERI01G23000 I 0.000
OLONG_022047 Oryza longistaminata OLONG_022047 I 0.000
OLONG_021599 Oryza longistaminata OLONG_021599 I 0.000
OLONG_003667 Oryza longistaminata OLONG_003667 I 0.000
OPUNC02G01690 Oryza punctata OPUNC02G01690 I 0.000
OPUNC07G06790 Oryza punctata OPUNC07G06790 I 0.000
ORGLA01G0206000 Oryza glaberrima ORGLA01G0206000 I 0.000
POPTR_0002s16870 Populus trichocarpa POPTR_0002s16870 I 0.000
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I 0.000
PGSC0003DMG400000088 Solanum tuberosum PGSC0003DMG400000088 I 0.000
OS07G0209800 Oryza sativa OS07G0209800 I 0.000
OS05G0569300 Oryza sativa OS05G0569300 I 0.000
OS01G0658900 Oryza sativa OS01G0658900 I 0.000
ORUFI07G07050 Oryza rufipogon ORUFI07G07050 I 0.000
ORUFI05G28170 Oryza rufipogon ORUFI05G28170 I 0.000
ORUFI01G28110 Oryza rufipogon ORUFI01G28110 I 0.000
ORGLA05G0227800 Oryza glaberrima ORGLA05G0227800 I 0.000
OGLUM07G06770 Oryza glumaepatula OGLUM07G06770 I 0.000