CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si019443m.g
(
Setaria italica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Si019443m.g
T005307_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si019443m
AP2
103
154
RGYRGVRRRPSGKWAAEIRDPRKAARVWLGTFVTAEDAARAYDAAALRFRGS
Links
Other
AP2
family TFs
Other
Setaria italica
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si019270m.g
Setaria italica
Si019270m.g
N
0.774
Si019157m.g
Setaria italica
Si019157m.g
I
0.747
Pavir.J16062
Panicum virgatum
Pavir.J16062
I
0.732
Sb04g022245
Sorghum bicolor
Sb04g022245
I
0.728
Si010967m.g
Setaria italica
Si010967m.g
I
0.728
Pavir.J15316
Panicum virgatum
Pavir.J15316
I
0.726
OPUNC02G17880
Oryza punctata
OPUNC02G17880
I
0.723
LPERR04G09480
Leersia perrieri
LPERR04G09480
I
0.721
GRMZM2G175525
Zea mays
GRMZM2G175525
I
0.718
Sb06g016710
Sorghum bicolor
Sb06g016710
I
0.714
OBART02G19930
Oryza barthii
OBART02G19930
I
0.713
ORGLA02G0170800
Oryza glaberrima
ORGLA02G0170800
I
0.713
OS02G0546600
Oryza sativa
OS02G0546600
I
0.713
ORUFI02G21030
Oryza rufipogon
ORUFI02G21030
I
0.713
SELMODRAFT_73174
Selaginella moellendorffii
SELMODRAFT_73174
I
0.710
SELMODRAFT_73177
Selaginella moellendorffii
SELMODRAFT_73177
I
0.710
ORUFI02G21040
Oryza rufipogon
ORUFI02G21040
I
0.709
OGLUM02G20200
Oryza glumaepatula
OGLUM02G20200
I
0.708
BRADI3G41543
Brachypodium distachyon
BRADI3G41543
I
0.705
Pavir.Aa01785
Panicum virgatum
Pavir.Aa01785
I
0.705
Sb08g004260
Sorghum bicolor
Sb08g004260
I
0.689
OS04G0429050
Oryza sativa
OS04G0429050
I
0.686
ORUFI04G13990
Oryza rufipogon
ORUFI04G13990
I
0.686
ORGLA04G0098100
Oryza glaberrima
ORGLA04G0098100
I
0.686
ONIVA04G10960
Oryza nivara
ONIVA04G10960
I
0.686
OMERI04G11450
Oryza meridionalis
OMERI04G11450
I
0.686
Sb07g025843
Sorghum bicolor
Sb07g025843
I
0.684
MLOC_10878
Hordeum vulgare
MLOC_10878
I
0.684
LPERR02G27530
Leersia perrieri
LPERR02G27530
I
0.682
Pavir.J28880
Panicum virgatum
Pavir.J28880
I
0.682
GRMZM2G309731
Zea mays
GRMZM2G309731
I
0.681
OBART12G04120
Oryza barthii
OBART12G04120
I
0.680
BGIOSGA036561
Oryza indica
BGIOSGA036561
I
0.680
OGLUM12G04880
Oryza glumaepatula
OGLUM12G04880
I
0.680
OMERI08G16840
Oryza meridionalis
OMERI08G16840
I
0.680
BGIOSGA029071
Oryza indica
BGIOSGA029071
I
0.680
OPUNC12G04190
Oryza punctata
OPUNC12G04190
I
0.680
ORGLA08G0225800
Oryza glaberrima
ORGLA08G0225800
I
0.680
ONIVA12G03810
Oryza nivara
ONIVA12G03810
I
0.680
ORUFI12G04720
Oryza rufipogon
ORUFI12G04720
I
0.680
OPUNC08G19980
Oryza punctata
OPUNC08G19980
I
0.677