VIT_00s0341g00080 (Vitis vinifera)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 VIT_00s0341g00080 T006018_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TINY
M01094_2.00
Arabidopsis thaliana
NHRCCGACAN

NTGTCGGYDN
PBM
Lambert et al.(2019)
pTH11541
0.733 0.860
TINY
M06669_2.00
Arabidopsis thaliana
HNYCRCCGACANHDN

NHDNTGTCGGYGRND
Dap-seq
OMalley et al.(2016)
TINY_col_a
0.733 0.860
ERF034
M06614_2.00
Arabidopsis thaliana
NHNYCACCGACANHD

HDNTGTCGGTGRNDN
Dap-seq
OMalley et al.(2016)
At2g44940_col_a
0.689 0.880
ERF034
M06615_2.00
Arabidopsis thaliana
NDBCACCGACANH

DNTGTCGGTGVHN
Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a
0.689 0.880
Q5MAR7_BRANA
M09742_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBIII1_01
0.685 0.880
Q3HS44_BRANA
M09741_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBIII2_01
0.685 0.880
Q3HS43_BRANA
M09740_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBIII3_01
0.685 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_00s0341g00080.t01 AP2 46 97

Links

Other AP2 family TFs
Other Vitis vinifera TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Q3HS44_BRANA Brassica napus Q3HS44_BRANA D 0.685
Q3HS43_BRANA Brassica napus Q3HS43_BRANA D 0.685
Q5MAR7_BRANA Brassica napus Q5MAR7_BRANA D 0.685
TINY Arabidopsis thaliana AT5G25810 D 0.733
ERF034 Arabidopsis thaliana AT2G44940 D 0.689
cassava17185.m1 Manihot esculenta cassava17185.m1 I 0.730
30174.m008790 Ricinus communis 30174.m008790 I 0.692
cassava17387.m1 Manihot esculenta cassava17387.m1 I 0.690
29794.m003381 Ricinus communis 29794.m003381 I 0.730
Pm017610 Prunus mume Pm017610 I 0.689
Pm013463 Prunus mume Pm013463 I 0.677
Pm005151 Prunus mume Pm005151 I 0.730
Cla022553 Citrullus lanatus Cla022553 I 0.715
Cla021417 Citrullus lanatus Cla021417 I 0.747
Cla012859 Citrullus lanatus Cla012859 I 0.693
cassava18256.valid.m1 Manihot esculenta cassava18256.valid.m1 I 0.730
cassava19875.m1 Manihot esculenta cassava19875.m1 I 0.680
cassava19912.m1 Manihot esculenta cassava19912.m1 I 0.680
Bostr.25993s0277 Boechera stricta Bostr.25993s0277 I 0.689
Bostr.23794s0528 Boechera stricta Bostr.23794s0528 I 0.681
Bostr.20055s0079 Boechera stricta Bostr.20055s0079 I 0.727
Aquca_011_00566 Aquilegia coerulea Aquca_011_00566 I 0.691
mgf026339m Mimulus guttatus mgf026339m I 0.707
mgf024816m Mimulus guttatus mgf024816m I 0.683
mgf024703m Mimulus guttatus mgf024703m I 0.717
Cucsa.259750 Cucumis sativus Cucsa.259750 I 0.736
Cucsa.161310 Cucumis sativus Cucsa.161310 I 0.712
Cucsa.038760 Cucumis sativus Cucsa.038760 I 0.693
Ca_28185 Cicer arietinum Ca_28185 I 0.736
Ca_18948 Cicer arietinum Ca_18948 I 0.705
Ca_14911 Cicer arietinum Ca_14911 I 0.715
TCM_037194 Theobroma cacao TCM_037194 I 0.730
TCM_014892 Theobroma cacao TCM_014892 I 0.683
TCM_005639 Theobroma cacao TCM_005639 I 0.691
Solyc08g078420.1 Solanum lycopersicum Solyc08g078420.1 I 0.690
Solyc08g078410.1 Solanum lycopersicum Solyc08g078410.1 I 0.690
Solyc08g066660.1 Solanum lycopersicum Solyc08g066660.1 I 0.711
Solyc05g050830.1 Solanum lycopersicum Solyc05g050830.1 I 0.703
Solyc01g090560.2 Solanum lycopersicum Solyc01g090560.2 I 0.753
SELMODRAFT_71661 Selaginella moellendorffii SELMODRAFT_71661 I 0.689
Si012254m.g Setaria italica Si012254m.g I 0.709
Traes_2AL_43491B9E0 Triticum aestivum Traes_2AL_43491B9E0 I 0.691
Traes_2AL_45E6314EF Triticum aestivum Traes_2AL_45E6314EF I 0.723
Ca_01908 Cicer arietinum Ca_01908 I 0.736
VIT_15s0021g02110 Vitis vinifera VIT_15s0021g02110 I 0.749
VIT_04s0008g03400 Vitis vinifera VIT_04s0008g03400 I 0.730
VIT_00s0632g00010 Vitis vinifera VIT_00s0632g00010 I 0.750
VIT_00s0341g00070 Vitis vinifera VIT_00s0341g00070 I 0.750
Traes_6DL_901793D6D Triticum aestivum Traes_6DL_901793D6D I 0.713
Traes_6DL_3019F176A Triticum aestivum Traes_6DL_3019F176A I 0.709
Traes_2DL_A336122501 Triticum aestivum Traes_2DL_A336122501 I 0.691
Traes_2BL_FC0F8A3DC Triticum aestivum Traes_2BL_FC0F8A3DC I 0.691
Traes_2BL_593E1CCC2 Triticum aestivum Traes_2BL_593E1CCC2 I 0.723
Si010703m.g Setaria italica Si010703m.g I 0.723
Bostr.29827s0238 Boechera stricta Bostr.29827s0238 I 0.730
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.698
Pavir.Ga01095 Panicum virgatum Pavir.Ga01095 I 0.723
Pavir.Ga01093 Panicum virgatum Pavir.Ga01093 I 0.709
Pavir.Aa00834 Panicum virgatum Pavir.Aa00834 I 0.716
orange1.1g041015m.g Citrus sinensis orange1.1g041015m.g I 0.695
orange1.1g027107m.g Citrus sinensis orange1.1g027107m.g I 0.730
orange1.1g023148m.g Citrus sinensis orange1.1g023148m.g I 0.705
MDP0000790788 Malus domestica MDP0000790788 I 0.758
MDP0000242611 Malus domestica MDP0000242611 I 0.730
MDP0000241650 Malus domestica MDP0000241650 I 0.730
MDP0000174352 Malus domestica MDP0000174352 I 0.734
Pavir.Gb01128 Panicum virgatum Pavir.Gb01128 I 0.709
Pavir.J17742 Panicum virgatum Pavir.J17742 I 0.723
chr1.LjT23O20.60.nd Lotus japonicus chr1.LjT23O20.60.nd I 0.725
chr1.CM0171.140.nc Lotus japonicus chr1.CM0171.140.nc I 0.704
PK28082.1 Cannabis sativa PK28082.1 I 0.730
PK01156.1 Cannabis sativa PK01156.1 I 0.680
Thhalv10017258m.g Eutrema salsugineum Thhalv10017258m.g I 0.685
Thhalv10015895m.g Eutrema salsugineum Thhalv10015895m.g I 0.728
Thhalv10006200m.g Eutrema salsugineum Thhalv10006200m.g I 0.691
Thhalv10001792m.g Eutrema salsugineum Thhalv10001792m.g I 0.689
SapurV1A.0291s0070 Salix purpurea SapurV1A.0291s0070 I 0.730
SapurV1A.0033s0230 Salix purpurea SapurV1A.0033s0230 I 0.690
Lus10007799.g Linum usitatissimum Lus10007799.g I 0.684
Lus10004738.g Linum usitatissimum Lus10004738.g I 0.684
Gorai.010G106600 Gossypium raimondii Gorai.010G106600 I 0.727
Eucgr.C02928 Eucalyptus grandis Eucgr.C02928 I 0.720
Eucgr.C00546 Eucalyptus grandis Eucgr.C00546 I 0.728
Ciclev10024602m.g Citrus clementina Ciclev10024602m.g I 0.705
Ciclev10009370m.g Citrus clementina Ciclev10009370m.g I 0.730
Ciclev10006536m.g Citrus clementina Ciclev10006536m.g I 0.695
Carubv10024111m.g Capsella rubella Carubv10024111m.g I 0.685
Carubv10023699m.g Capsella rubella Carubv10023699m.g I 0.689
Carubv10003136m.g Capsella rubella Carubv10003136m.g I 0.727
Carubv10002601m.g Capsella rubella Carubv10002601m.g I 0.733
Cagra.0993s0081 Capsella grandiflora Cagra.0993s0081 I 0.685
Eucgr.D02102 Eucalyptus grandis Eucgr.D02102 I 0.698
Eucgr.E01593 Eucalyptus grandis Eucgr.E01593 I 0.749
Gorai.007G087100 Gossypium raimondii Gorai.007G087100 I 0.687
Gorai.004G289800 Gossypium raimondii Gorai.004G289800 I 0.711
Gorai.004G165300 Gossypium raimondii Gorai.004G165300 I 0.686
Gorai.003G063500 Gossypium raimondii Gorai.003G063500 I 0.681
Gorai.001G176500 Gossypium raimondii Gorai.001G176500 I 0.691
gene25758-v1.0-hybrid Fragaria vesca gene25758-v1.0-hybrid I 0.736
gene08876-v1.0-hybrid Fragaria vesca gene08876-v1.0-hybrid I 0.694
gene08873-v1.0-hybrid Fragaria vesca gene08873-v1.0-hybrid I 0.730
gene08838-v1.0-hybrid Fragaria vesca gene08838-v1.0-hybrid I 0.730
evm.TU.supercontig_7.269 Carica papaya evm.TU.supercontig_7.269 I 0.736
Cagra.0239s0048 Capsella grandiflora Cagra.0239s0048 I 0.689
SELMODRAFT_71659 Selaginella moellendorffii SELMODRAFT_71659 I 0.689
MTR_2g101340 Medicago truncatula MTR_2g101340 I 0.679
GLYMA14G22740 Glycine max GLYMA14G22740 I 0.730
GLYMA13G43210 Glycine max GLYMA13G43210 I 0.734
GLYMA11G03790 Glycine max GLYMA11G03790 I 0.688
GLYMA08G21650 Glycine max GLYMA08G21650 I 0.751
GLYMA07G14560 Glycine max GLYMA07G14560 I 0.759
GLYMA07G02001 Glycine max GLYMA07G02001 I 0.741
GLYMA06G08990 Glycine max GLYMA06G08990 I 0.725
GLYMA04G08901 Glycine max GLYMA04G08901 I 0.724
GLYMA03G27050 Glycine max GLYMA03G27050 I 0.759
TINY2 Arabidopsis lyrata fgenesh2_kg.6__1130__AT5G11590.1 I 0.727
GLYMA15G02130 Glycine max GLYMA15G02130 I 0.737
GLYMA17G27520 Glycine max GLYMA17G27520 I 0.727
GRMZM2G172936 Zea mays GRMZM2G172936 I 0.706
MTR_1g006660 Medicago truncatula MTR_1g006660 I 0.713
MLOC_75601 Hordeum vulgare MLOC_75601 I 0.713
MLOC_3095 Hordeum vulgare MLOC_3095 I 0.709
LPERR04G16900 Leersia perrieri LPERR04G16900 I 0.706
LPERR02G21590 Leersia perrieri LPERR02G21590 I 0.709
GSMUA_Achr7G09450_001 Musa acuminata GSMUA_Achr7G09450_001 I 0.727
GSMUA_Achr1G04350_001 Musa acuminata GSMUA_Achr1G04350_001 I 0.677
GSMUA_Achr1G01620_001 Musa acuminata GSMUA_Achr1G01620_001 I 0.688
GSMUA_Achr10G27680_001 Musa acuminata GSMUA_Achr10G27680_001 I 0.689
GSMUA_Achr10G21470_001 Musa acuminata GSMUA_Achr10G21470_001 I 0.730
fgenesh2_kg.4__2683__AT2G44940.1 Arabidopsis lyrata fgenesh2_kg.4__2683__AT2G44940.1 I 0.689
ATERF38 Arabidopsis lyrata fgenesh2_kg.4__1597__AT2G35700.1 I 0.685
F775_04501 Aegilops tauschii F775_04501 I 0.691
Bo6g077080 Brassica oleracea Bo6g077080 I 0.713
Bo4g195280 Brassica oleracea Bo4g195280 I 0.682
Bo4g036220 Brassica oleracea Bo4g036220 I 0.685
Bo4g024220 Brassica oleracea Bo4g024220 I 0.682
Bo2g010530 Brassica oleracea Bo2g010530 I 0.717
BGIOSGA016884 Oryza indica BGIOSGA016884 I 0.709
BGIOSGA016883 Oryza indica BGIOSGA016883 I 0.689
BGIOSGA016882 Oryza indica BGIOSGA016882 I 0.723
DREB3 Arabidopsis thaliana AT5G11590 I 0.727
AMTR_s00111p00051610 Amborella trichopoda AMTR_s00111p00051610 I 0.726
Bo7g095710 Brassica oleracea Bo7g095710 I 0.733
Bo8g095240 Brassica oleracea Bo8g095240 I 0.691
Bo9g170060 Brassica oleracea Bo9g170060 I 0.727
BRADI3G50630 Brachypodium distachyon BRADI3G50630 I 0.706
BRADI3G50620 Brachypodium distachyon BRADI3G50620 I 0.721
Bra040333 Brassica rapa Bra040333 I 0.682
Bra023332 Brassica rapa Bra023332 I 0.715
Bra009862 Brassica rapa Bra009862 I 0.733
Bra008952 Brassica rapa Bra008952 I 0.727
Bra007539 Brassica rapa Bra007539 I 0.691
Bra005314 Brassica rapa Bra005314 I 0.685
Bra004878 Brassica rapa Bra004878 I 0.682
Bra003415 Brassica rapa Bra003415 I 0.713
AMTR_s00056p00064760 Amborella trichopoda AMTR_s00056p00064760 I 0.727
SELMODRAFT_125385 Selaginella moellendorffii SELMODRAFT_125385 I 0.714
OS04G0549800 Oryza sativa OS04G0549800 I 0.689
OS04G0549700 Oryza sativa OS04G0549700 I 0.723
OS02G0657000 Oryza sativa OS02G0657000 I 0.709
OS02G0656600 Oryza sativa OS02G0656600 I 0.723
ORUFI10G19670 Oryza rufipogon ORUFI10G19670 I 0.686
ORUFI04G22430 Oryza rufipogon ORUFI04G22430 I 0.709
ORUFI04G22410 Oryza rufipogon ORUFI04G22410 I 0.689
ORUFI04G22400 Oryza rufipogon ORUFI04G22400 I 0.723
ORUFI02G28010 Oryza rufipogon ORUFI02G28010 I 0.709
ORGLA04G0179000 Oryza glaberrima ORGLA04G0179000 I 0.709
OS04G0550200 Oryza sativa OS04G0550200 I 0.709
PGSC0003DMG400002235 Solanum tuberosum PGSC0003DMG400002235 I 0.711
PGSC0003DMG400004825 Solanum tuberosum PGSC0003DMG400004825 I 0.690
SELMODRAFT_104978 Selaginella moellendorffii SELMODRAFT_104978 I 0.714
Sb06g024530 Sorghum bicolor Sb06g024530 I 0.723
PRUPE_ppa009812mg Prunus persica PRUPE_ppa009812mg I 0.689
PRUPE_ppa009533mg Prunus persica PRUPE_ppa009533mg I 0.730
POPTR_0002s14210 Populus trichocarpa POPTR_0002s14210 I 0.689
PGSC0003DMG400026035 Solanum tuberosum PGSC0003DMG400026035 I 0.753
PGSC0003DMG400018581 Solanum tuberosum PGSC0003DMG400018581 I 0.712
PGSC0003DMG400012087 Solanum tuberosum PGSC0003DMG400012087 I 0.780
PGSC0003DMG400007025 Solanum tuberosum PGSC0003DMG400007025 I 0.703
PGSC0003DMG400004826 Solanum tuberosum PGSC0003DMG400004826 I 0.681
ORGLA04G0178700 Oryza glaberrima ORGLA04G0178700 I 0.689
ORGLA04G0178600 Oryza glaberrima ORGLA04G0178600 I 0.723
ORGLA02G0228000 Oryza glaberrima ORGLA02G0228000 I 0.723
OMERI02G25910 Oryza meridionalis OMERI02G25910 I 0.709
OMERI02G25900 Oryza meridionalis OMERI02G25900 I 0.723
OGLUM04G20790 Oryza glumaepatula OGLUM04G20790 I 0.709
OGLUM04G20760 Oryza glumaepatula OGLUM04G20760 I 0.689
OGLUM04G20750 Oryza glumaepatula OGLUM04G20750 I 0.723
OGLUM02G27070 Oryza glumaepatula OGLUM02G27070 I 0.709
OGLUM02G27010 Oryza glumaepatula OGLUM02G27010 I 0.723
OBART04G20820 Oryza barthii OBART04G20820 I 0.689
MTR_8g013860 Medicago truncatula MTR_8g013860 I 0.756
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.732
OMERI04G17260 Oryza meridionalis OMERI04G17260 I 0.723
OMERI04G17270 Oryza meridionalis OMERI04G17270 I 0.689
OMERI04G17290 Oryza meridionalis OMERI04G17290 I 0.709
OPUNC04G18530 Oryza punctata OPUNC04G18530 I 0.709
OPUNC04G18520 Oryza punctata OPUNC04G18520 I 0.689
OPUNC04G18500 Oryza punctata OPUNC04G18500 I 0.723
OPUNC02G24230 Oryza punctata OPUNC02G24230 I 0.709
OPUNC02G24210 Oryza punctata OPUNC02G24210 I 0.723
ONIVA04G19090 Oryza nivara ONIVA04G19090 I 0.709
ONIVA04G19060 Oryza nivara ONIVA04G19060 I 0.689
ONIVA04G19040 Oryza nivara ONIVA04G19040 I 0.723
ONIVA02G28990 Oryza nivara ONIVA02G28990 I 0.709
ONIVA02G28960 Oryza nivara ONIVA02G28960 I 0.723
MTR_3g110205 Medicago truncatula MTR_3g110205 I 0.728