Ca_00417 (Cicer arietinum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Ca_00417 T006263_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN

NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.697 0.765
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND

HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.697 0.765
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_00417 AP2 21 72

Links

Other AP2 family TFs
Other Cicer arietinum TFs

236 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CGI_10017095 Crassostrea gigas CGI_10017095 N 0.000
rbbB Dictyostelium discoideum DDB_G0268778 N 0.000
EFA75025.1 Polysphondylium pallidum EFA75025.1 N 0.000
Thhalv10017702m.g Eutrema salsugineum Thhalv10017702m.g N 0.000