Ca_12205 (Cicer arietinum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Ca_12205 T006334_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK17878.1
M01099_2.00
Cannabis sativa
CGCCGYCR

YGRCGGCG
PBM
Lambert et al.(2019)
pTH10133
0.779 0.830
ERF3
M01607_2.00
Arabidopsis thaliana
CGCCGSCR

YGSCGGCG
PBM
Weirauch et al.(2014)
pTH8109
0.764 0.872
ERF3
M06584_2.00
Arabidopsis thaliana
YHDYCKCCGCCGYHD

HDRCGGCGGMGRHDR
Dap-seq
OMalley et al.(2016)
ERF3_col_a
0.764 0.872
ERF3
M06585_2.00
Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR

YGRCGGCGGHRNNDNHDDNN
Dap-seq
OMalley et al.(2016)
ERF3_colamp_a
0.764 0.872
OS05G0497200
M01636_2.00
Oryza sativa
CGSCGCCR

YGGCGSCG
PBM
Weirauch et al.(2014)
pTH8640
0.736 0.766
ERF9
M06670_2.00
Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN

NDRHDRHDDHGRCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF9_col_a
0.731 0.787
ERF9
M06671_2.00
Arabidopsis thaliana
NNHDSCGCCGYCRHWDN

NHWDYGRCGGCGSHDNN
Dap-seq
OMalley et al.(2016)
ERF9_colamp_a
0.731 0.787
ERF4_TOBAC
M09728_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_02
0.727 0.745
PK19363.1
M01100_2.00
Cannabis sativa
NMGCCGHMNN

NNKDCGGCKN
PBM
Lambert et al.(2019)
pTH10138
0.722 0.723
PK19363.1
M01643_2.00
Cannabis sativa
CGCCGYCD

HGRCGGCG
PBM
Weirauch et al.(2014)
pTH9609
0.722 0.723
ERF4
M01616_2.00
Arabidopsis thaliana
VCGCCGCC

GGCGGCGB
PBM
Weirauch et al.(2014)
pTH8156
0.709 0.745
ERF4
M06616_2.00
Arabidopsis thaliana
YCDCCGCCGCCRHHD

HDDYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF4_col_a
0.709 0.745
ERF4
M06617_2.00
Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN

NNHDDYGRCGGCGSNDNNDN
Dap-seq
OMalley et al.(2016)
ERF4_colamp_a
0.709 0.745
Q5Y836_TOBAC
M09732_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF5_02
0.691 0.681
ERF098
M01618_2.00
Arabidopsis thaliana
NNGCCGNC

GNCGGCNN
PBM
Weirauch et al.(2014)
pTH8259
0.679 0.723
ERF5
M00721_2.00
Arabidopsis thaliana
NNNGSMRNMN

NKNYKSCNNN
PBM
Chang et al.(2013)
pTH7197
0.679 0.723
ERF5
M06674_2.00
Arabidopsis thaliana
YCDYCKCCGCCGYCD

HGRCGGCGGMGRHGR
Dap-seq
OMalley et al.(2016)
ERF5_col_a
0.679 0.723
ERF5
M06675_2.00
Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN

NNNHDNHDRYGGCGGCGVHDN
Dap-seq
OMalley et al.(2016)
ERF5_colamp_a
0.679 0.723
ERF11
M01606_2.00
Arabidopsis thaliana
NHGCCGNHNN

NNDNCGGCDN
PBM
Weirauch et al.(2014)
pTH8117
0.677 0.681
ERF11
M06575_2.00
Arabidopsis thaliana
NHNNHDSCGCCGYCRHHNNN

NNNDDYGRCGGCGSHDNNDN
Dap-seq
OMalley et al.(2016)
ERF11_colamp_a
0.677 0.681
ERF11
M06576_2.00
Arabidopsis thaliana
NHNYCKCCGCCGYHD

HDRCGGCGGMGRNDN
Dap-seq
OMalley et al.(2016)
ERF11_col_b
0.677 0.681
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_12205 AP2 29 80

Links

Other AP2 family TFs
Other Cicer arietinum TFs

443 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BCL6 Homo sapiens ENSG00000113916 D 0.000
Bcl6 Mus musculus ENSMUSG00000022508 D 0.000
bcl6.L Xenopus laevis XB-GENE-984483 I 0.000
BCL6 Taeniopygia guttata ENSTGUG00000009413 I 0.000
BCL6 Sus scrofa ENSSSCG00000011810 I 0.000
ENSSHAG00000013935 Sarcophilus harrisii ENSSHAG00000013935 I 0.000
Bcl6 Rattus norvegicus ENSRNOG00000001843 I 0.000
BCL6 Pan troglodytes ENSPTRG00000015728 I 0.000
ENSPSIG00000014529 Pelodiscus sinensis ENSPSIG00000014529 I 0.000
ENSPPYG00000014395 Pongo abelii ENSPPYG00000014395 I 0.000
ENSPANG00000017677 Papio anubis ENSPANG00000017677 I 0.000
BCL6 Ochotona princeps ENSOPRG00000005797 I 0.000
BCL6 Tursiops truncatus ENSTTRG00000017230 I 0.000
Aan_R013387 Calypte anna Aan_R013387 I 0.000
Afo_R010236 Aptenodytes forsteri Afo_R010236 I 0.000
bcl6 Xenopus tropicalis XB-GENE-984479 I 0.000
bcl6.S Xenopus laevis XB-GENE-17336238 I 0.000
Tal_R005794 Tyto alba Tal_R005794 I 0.000
Pvit_01837 Pogona vitticeps Pvit_01837 I 0.000
Myotis_brandtii_BCL6_10016106 Myotis brandtii Myotis_brandtii_BCL6_10016106 I 0.000
Gfo_R004424 Geospiza fortis Gfo_R004424 I 0.000
ENSP00000384371 Macaca fascicularis ENSP00000384371 I 0.000
ENSBTAP00000001978-D1 Bos grunniens ENSBTAP00000001978-D1 I 0.000
Cmyd_10010560 Chelonia mydas Cmyd_10010560 I 0.000
Brh_R006050 Buceros rhinoceros Brh_R006050 I 0.000
Alligator_sinensis_CCG010229.1 Alligator sinensis Alligator_sinensis_CCG010229.1 I 0.000
BCL6 Otolemur garnettii ENSOGAG00000007638 I 0.000
BCL6 Oryctolagus cuniculus ENSOCUG00000005429 I 0.000
BCL6 Ornithorhynchus anatinus ENSOANG00000000872 I 0.000
BCL6 Equus caballus ENSECAG00000004556 I 0.000
Bcl6 Dipodomys ordii ENSDORG00000005608 I 0.000
BCL6 Dasypus novemcinctus ENSDNOG00000004306 I 0.000
ENSCSAG00000009138 Chlorocebus sabaeus ENSCSAG00000009138 I 0.000
BCL6 Cavia porcellus ENSCPOG00000004090 I 0.000
BCL6 Callithrix jacchus ENSCJAG00000014375 I 0.000
BCL6 Canis familiaris ENSCAFG00000013904 I 0.000
BCL6 Bos taurus ENSBTAG00000001511 I 0.000
ENSAPLG00000015868 Anas platyrhynchos ENSAPLG00000015868 I 0.000
ENSAMEG00000000812 Ailuropoda melanoleuca ENSAMEG00000000812 I 0.000
BCL6 Erinaceus europaeus ENSEEUG00000000344 I 0.000
BCL6 Echinops telfairi ENSETEG00000014830 I 0.000
ENSFALG00000007407 Ficedula albicollis ENSFALG00000007407 I 0.000
ENSNLEG00000006705 Nomascus leucogenys ENSNLEG00000006705 I 0.000
ENSMPUG00000003415 Mustela putorius furo ENSMPUG00000003415 I 0.000
BCL6 Myotis lucifugus ENSMLUG00000012905 I 0.000
BCL6 Microcebus murinus ENSMICG00000001780 I 0.000
BCL6 Meleagris gallopavo ENSMGAG00000007602 I 0.000
ENSMEUG00000004411 Macropus eugenii ENSMEUG00000004411 I 0.000
BCL6 Loxodonta africana ENSLAFG00000012300 I 0.000
BCL6 Gorilla gorilla ENSGGOG00000026549 I 0.000
BCL6 Gallus gallus ENSGALG00000007357 I 0.000
BCL6 Felis catus ENSFCAG00000006810 I 0.000
BCL6 Anolis carolinensis ENSACAG00000006666 I 0.000