CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla012182
(
Citrullus lanatus
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Cla012182
T006459_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF019
M01092_2.00
Arabidopsis thaliana
CRCCGRCV
BGYCGGYG
PBM
Lambert et al.(2019)
pTH11534
0.703
0.760
ERF019
M06571_2.00
Arabidopsis thaliana
HDYCACCGACAHNNN
NNNDTGTCGGTGRHD
Dap-seq
OMalley et al.(2016)
At1g22810_colamp_a
0.703
0.760
ERF019
M06572_2.00
Arabidopsis thaliana
DYCACCGHCRHHDYC
GRHDDYGDCGGTGRH
Dap-seq
OMalley et al.(2016)
At1g22810_col
0.703
0.760
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla012182
AP2
7
58
KKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRP
Links
Other
AP2
family TFs
Other
Citrullus lanatus
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy