CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29739.m003717
(
Ricinus communis
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
29739.m003717
T006713_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29739.m003717
AP2
8
59
SRYKGVRMRKWGKWVAEIRQPNSRGRIWLGSYNTAEEAARAYDAALFCLRGP
Links
Other
AP2
family TFs
Other
Ricinus communis
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava10446.m1
Manihot esculenta
cassava10446.m1
N
0.817
SapurV1A.0521s0060
Salix purpurea
SapurV1A.0521s0060
N
0.808
POPTR_0018s00700
Populus trichocarpa
POPTR_0018s00700
N
0.802
TCM_037487
Theobroma cacao
TCM_037487
N
0.792
SapurV1A.2946s0020
Salix purpurea
SapurV1A.2946s0020
N
0.783
SapurV1A.0283s0190
Salix purpurea
SapurV1A.0283s0190
N
0.783
Solyc07g042230.1
Solanum lycopersicum
Solyc07g042230.1
N
0.782
Eucgr.C00781
Eucalyptus grandis
Eucgr.C00781
N
0.775
mgf017314m
Mimulus guttatus
mgf017314m
N
0.774
PGSC0003DMG400023295
Solanum tuberosum
PGSC0003DMG400023295
N
0.774
VIT_11s0016g00670
Vitis vinifera
VIT_11s0016g00670
N
0.752
Gorai.009G037000
Gossypium raimondii
Gorai.009G037000
N
0.713
GSMUA_Achr8G30520_001
Musa acuminata
GSMUA_Achr8G30520_001
N
0.690
orange1.1g032258m.g
Citrus sinensis
orange1.1g032258m.g
N
0.685
Ciclev10009827m.g
Citrus clementina
Ciclev10009827m.g
N
0.685