cassava21336.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava21336.m1 T006844_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava21336.m1 AP2 39 89

Links

Other AP2 family TFs
Other Manihot esculenta TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
fgenesh1_pm.C_scaffold_1001063 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001063 I 0.678
scaffold_101390.1 Arabidopsis lyrata scaffold_101390.1 I 0.678
Cla006314 Citrullus lanatus Cla006314 N 0.703
Ciclev10005869m.g Citrus clementina Ciclev10005869m.g N 0.732
orange1.1g028004m.g Citrus sinensis orange1.1g028004m.g N 0.732
Eucgr.D01924 Eucalyptus grandis Eucgr.D01924 I 0.704
Gorai.007G010200 Gossypium raimondii Gorai.007G010200 N 0.700
Gorai.006G197200 Gossypium raimondii Gorai.006G197200 N 0.718
cassava35063.m1 Manihot esculenta cassava35063.m1 N 0.698
mgf025854m Mimulus guttatus mgf025854m I 0.686
OPUNC04G19950 Oryza punctata OPUNC04G19950 N 0.694
POPTR_0003s12120 Populus trichocarpa POPTR_0003s12120 N 0.680
SapurV1A.0068s0570 Salix purpurea SapurV1A.0068s0570 N 0.684
SapurV1A.0400s0170 Salix purpurea SapurV1A.0400s0170 N 0.681
TCM_015083 Theobroma cacao TCM_015083 N 0.711
VIT_02s0025g04440 Vitis vinifera VIT_02s0025g04440 N 0.706