gw1.2.360.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gw1.2.360.1 T007277_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
A5JTT1_WHEAT
M09700_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_01
0.699 0.854
ERF1A
M00848_2.00
Arabidopsis thaliana
NNNNRNN

NNYNNNN
PBM
Franco-Zorrilla et al.(2014)
ATERF1
0.695 0.875
ERF1A
M00720_2.00
Arabidopsis thaliana
NMGCCRNCN

NGNYGGCKN
PBM
Chang et al.(2013)
pTH7202
0.695 0.875
ERF2_TOBAC
M09727_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF2_01
0.694 0.833
ERF115
M06657_2.00
Arabidopsis thaliana
CCGCCGYMRYHDCCR

YGGHDRYKRCGGCGG
Dap-seq
OMalley et al.(2016)
ERF115_col_a
0.693 0.771
ERF115
M06658_2.00
Arabidopsis thaliana
CKCCGCCGYMRYHDY

RHDRYKRCGGCGGMG
Dap-seq
OMalley et al.(2016)
ERF115_colamp_a
0.693 0.771
ERF113
M01629_2.00
Arabidopsis thaliana
NNGCCGHHNN

NNDDCGGCNN
PBM
Weirauch et al.(2014)
pTH8097
0.678 0.771
ERF2
M01631_2.00
Arabidopsis thaliana
NNNGCCGNCN

NGNCGGCNNN
PBM
Weirauch et al.(2014)
pTH8113
0.677 0.854
ERF2
M06672_2.00
Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND

HNRYGGCGGCGRHDRNDDNDD
Dap-seq
OMalley et al.(2016)
ERF2_col_a
0.677 0.854
ERF2
M06673_2.00
Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR

YGGCGGCKSHDNNDNNNNNNN
Dap-seq
OMalley et al.(2016)
ERF2_colamp_a
0.677 0.854
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.2.360.1 AP2 1 52

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

218 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
gw1.38.157.1 Physcomitrella patens gw1.38.157.1 N 0.764
gw1.2.361.1 Physcomitrella patens gw1.2.361.1 I 0.740
ATERF2 Arabidopsis lyrata fgenesh2_kg.8__70__AT5G47220.1 I 0.728
gw1.38.156.1 Physcomitrella patens gw1.38.156.1 I 0.726
Bra028703 Brassica rapa Bra028703 I 0.710
gw1.13.222.1 Physcomitrella patens gw1.13.222.1 I 0.710
Lus10022426.g Linum usitatissimum Lus10022426.g I 0.708
evm.TU.supercontig_13.175 Carica papaya evm.TU.supercontig_13.175 I 0.707
Eucgr.G01970 Eucalyptus grandis Eucgr.G01970 I 0.706
orange1.1g036963m.g Citrus sinensis orange1.1g036963m.g I 0.706
30147.m014403 Ricinus communis 30147.m014403 I 0.706
Ciclev10032575m.g Citrus clementina Ciclev10032575m.g I 0.706
mgf020878m Mimulus guttatus mgf020878m I 0.704
Gorai.007G046000 Gossypium raimondii Gorai.007G046000 I 0.704
OGLUM04G20600 Oryza glumaepatula OGLUM04G20600 I 0.704
SELMODRAFT_68470 Selaginella moellendorffii SELMODRAFT_68470 I 0.704
OMERI04G17100 Oryza meridionalis OMERI04G17100 I 0.704
cassava47034.m1 Manihot esculenta cassava47034.m1 I 0.704
ORUFI04G22230 Oryza rufipogon ORUFI04G22230 I 0.704
SELMODRAFT_86738 Selaginella moellendorffii SELMODRAFT_86738 I 0.704
OPUNC04G18300 Oryza punctata OPUNC04G18300 I 0.704
PK28774.1 Cannabis sativa PK28774.1 I 0.704
ORGLA04G0177100 Oryza glaberrima ORGLA04G0177100 I 0.704
ONIVA04G18900 Oryza nivara ONIVA04G18900 I 0.704
OS04G0546800 Oryza sativa OS04G0546800 I 0.704
BGIOSGA014605 Oryza indica BGIOSGA014605 I 0.704
GRMZM2G080516 Zea mays GRMZM2G080516 I 0.703
GRMZM2G055180 Zea mays GRMZM2G055180 I 0.703
MTR_6g033255 Medicago truncatula MTR_6g033255 I 0.703
Pavir.Gb00956 Panicum virgatum Pavir.Gb00956 I 0.703
Si030692m.g Setaria italica Si030692m.g I 0.703
Sb06g024355 Sorghum bicolor Sb06g024355 I 0.703
Cla019618 Citrullus lanatus Cla019618 I 0.703
Cucsa.156890 Cucumis sativus Cucsa.156890 I 0.703
Solyc12g042210.1 Solanum lycopersicum Solyc12g042210.1 I 0.703
Pavir.Ga01099 Panicum virgatum Pavir.Ga01099 I 0.703
Ciclev10003903m.g Citrus clementina Ciclev10003903m.g I 0.701
POPTR_0003s15030 Populus trichocarpa POPTR_0003s15030 I 0.701
orange1.1g005229m.g Citrus sinensis orange1.1g005229m.g I 0.701
PRUPE_ppa010186mg Prunus persica PRUPE_ppa010186mg I 0.701
Pm019546 Prunus mume Pm019546 I 0.701
TCM_014845 Theobroma cacao TCM_014845 I 0.701
Gorai.001G051300 Gossypium raimondii Gorai.001G051300 I 0.701
Cla007205 Citrullus lanatus Cla007205 I 0.700
LPERR04G16740 Leersia perrieri LPERR04G16740 I 0.700
SapurV1A.3099s0010 Salix purpurea SapurV1A.3099s0010 I 0.700
Cucsa.349200 Cucumis sativus Cucsa.349200 I 0.700
Traes_2AL_158F8EE88 Triticum aestivum Traes_2AL_158F8EE88 I 0.699
A5JTT1_WHEAT Triticum aestivum A5JTT1_WHEAT D 0.699
Traes_2BL_CF47A74CC Triticum aestivum Traes_2BL_CF47A74CC I 0.699
GLYMA02G07310 Glycine max GLYMA02G07310 I 0.698
GLYMA16G05190 Glycine max GLYMA16G05190 I 0.698
TCM_017352 Theobroma cacao TCM_017352 I 0.698
GLYMA16G26320 Glycine max GLYMA16G26320 I 0.698
GLYMA19G27790 Glycine max GLYMA19G27790 I 0.698
e_gw1.357.22.1 Physcomitrella patens e_gw1.357.22.1 I 0.698
VIT_16s0013g00890 Vitis vinifera VIT_16s0013g00890 I 0.697
Eucgr.A02924 Eucalyptus grandis Eucgr.A02924 I 0.697
cassava10717.m1 Manihot esculenta cassava10717.m1 I 0.697
OS02G0654700 Oryza sativa OS02G0654700 I 0.697
ORGLA02G0226500 Oryza glaberrima ORGLA02G0226500 I 0.697
ORUFI02G27830 Oryza rufipogon ORUFI02G27830 I 0.697
OMERI02G25760 Oryza meridionalis OMERI02G25760 I 0.697
LPERR02G21460 Leersia perrieri LPERR02G21460 I 0.697
OPUNC02G24070 Oryza punctata OPUNC02G24070 I 0.697
OGLUM02G26840 Oryza glumaepatula OGLUM02G26840 I 0.697
BGIOSGA005915 Oryza indica BGIOSGA005915 I 0.697
ONIVA02G28810 Oryza nivara ONIVA02G28810 I 0.697
evm.TU.supercontig_13.250 Carica papaya evm.TU.supercontig_13.250 I 0.696
Aquca_043_00039 Aquilegia coerulea Aquca_043_00039 I 0.696
Bra021048 Brassica rapa Bra021048 I 0.695
Cagra.3675s0007 Capsella grandiflora Cagra.3675s0007 I 0.695
Bo8g049470 Brassica oleracea Bo8g049470 I 0.695
Thhalv10001003m.g Eutrema salsugineum Thhalv10001003m.g I 0.695
Carubv10005497m.g Capsella rubella Carubv10005497m.g I 0.695
Carubv10027108m.g Capsella rubella Carubv10027108m.g I 0.695
ATERF-1 Arabidopsis lyrata fgenesh2_kg.7__2559__AT4G17500.1 I 0.695
Bostr.30275s0207 Boechera stricta Bostr.30275s0207 I 0.695
ERF1A Arabidopsis thaliana AT4G17500 D 0.695
Bra021047 Brassica rapa Bra021047 I 0.695
Cagra.3356s0041 Capsella grandiflora Cagra.3356s0041 I 0.695
Aquca_067_00004 Aquilegia coerulea Aquca_067_00004 I 0.695
cassava45576.m1 Manihot esculenta cassava45576.m1 I 0.694
ERF2_TOBAC Nicotiana tabacum ERF2_TOBAC D 0.694
gw1.25.154.1 Physcomitrella patens gw1.25.154.1 I 0.694
30131.m006971 Ricinus communis 30131.m006971 I 0.694
chr1.CM1880.220.nd Lotus japonicus chr1.CM1880.220.nd I 0.694
Thhalv10015583m.g Eutrema salsugineum Thhalv10015583m.g I 0.693
fgenesh2_kg.6__690__AT5G07310.1 Arabidopsis lyrata fgenesh2_kg.6__690__AT5G07310.1 I 0.693
Cagra.2662s0009 Capsella grandiflora Cagra.2662s0009 I 0.693
chr1.CM0094.670.nd Lotus japonicus chr1.CM0094.670.nd I 0.693
ERF115 Arabidopsis thaliana AT5G07310 D 0.693
Carubv10002723m.g Capsella rubella Carubv10002723m.g I 0.693
Bostr.13129s0235 Boechera stricta Bostr.13129s0235 I 0.693
Bo3g004290 Brassica oleracea Bo3g004290 I 0.693
gene06407-v1.0-hybrid Fragaria vesca gene06407-v1.0-hybrid I 0.693
SapurV1A.0517s0130 Salix purpurea SapurV1A.0517s0130 I 0.693
SapurV1A.0059s0630 Salix purpurea SapurV1A.0059s0630 I 0.693
GLYMA06G17180 Glycine max GLYMA06G17180 I 0.693
cassava19959.m1 Manihot esculenta cassava19959.m1 I 0.693
POPTR_0012s11030 Populus trichocarpa POPTR_0012s11030 I 0.693
Bo9g175390 Brassica oleracea Bo9g175390 I 0.693
Bra005932 Brassica rapa Bra005932 I 0.693
TCM_014762 Theobroma cacao TCM_014762 I 0.693
Bra009272 Brassica rapa Bra009272 I 0.693
Pm024604 Prunus mume Pm024604 I 0.692
PGSC0003DMG400016006 Solanum tuberosum PGSC0003DMG400016006 I 0.692
VIT_14s0068g01040 Vitis vinifera VIT_14s0068g01040 I 0.692
Solyc05g052050.1 Solanum lycopersicum Solyc05g052050.1 I 0.692
Pm023376 Prunus mume Pm023376 I 0.691
Cucsa.321160 Cucumis sativus Cucsa.321160 I 0.691
28192.m000255 Ricinus communis 28192.m000255 I 0.691
cassava4871.m1 Manihot esculenta cassava4871.m1 I 0.691
Lus10004368.g Linum usitatissimum Lus10004368.g I 0.691
orange1.1g044938m.g Citrus sinensis orange1.1g044938m.g I 0.691
GLYMA17G15480 Glycine max GLYMA17G15480 I 0.691
GSMUA_Achr11G20930_001 Musa acuminata GSMUA_Achr11G20930_001 I 0.691
GSMUA_Achr5G21050_001 Musa acuminata GSMUA_Achr5G21050_001 I 0.691
MDP0000787281 Malus domestica MDP0000787281 I 0.691
GLYMA11G03910 Glycine max GLYMA11G03910 I 0.691
GLYMA05G05180 Glycine max GLYMA05G05180 I 0.691
PK29475.1 Cannabis sativa PK29475.1 I 0.691
LjSGA_146586.1 Lotus japonicus LjSGA_146586.1 I 0.691
Bo2g008570 Brassica oleracea Bo2g008570 I 0.691
SapurV1A.1153s0050 Salix purpurea SapurV1A.1153s0050 I 0.691
GLYMA01G41520 Glycine max GLYMA01G41520 I 0.691
MDP0000665685 Malus domestica MDP0000665685 I 0.691
MDP0000517257 Malus domestica MDP0000517257 I 0.691
gene10841-v1.0-hybrid Fragaria vesca gene10841-v1.0-hybrid I 0.691
Gorai.004G195300 Gossypium raimondii Gorai.004G195300 I 0.691
TCM_015898 Theobroma cacao TCM_015898 I 0.691
VIT_02s0234g00130 Vitis vinifera VIT_02s0234g00130 I 0.691
Ciclev10021652m.g Citrus clementina Ciclev10021652m.g I 0.691
Gorai.006G214100 Gossypium raimondii Gorai.006G214100 I 0.691
PRUPE_ppa009707mg Prunus persica PRUPE_ppa009707mg I 0.691
MTR_4g100380 Medicago truncatula MTR_4g100380 I 0.691
MDP0000299277 Malus domestica MDP0000299277 I 0.691
POPTR_0001s15390 Populus trichocarpa POPTR_0001s15390 I 0.691
POPTR_0003s07910 Populus trichocarpa POPTR_0003s07910 I 0.691
PRUPE_ppa008772mg Prunus persica PRUPE_ppa008772mg I 0.691
Cla005705 Citrullus lanatus Cla005705 I 0.691
Cla003706 Citrullus lanatus Cla003706 I 0.690
GSMUA_Achr2G17810_001 Musa acuminata GSMUA_Achr2G17810_001 I 0.690
Cucsa.129630 Cucumis sativus Cucsa.129630 I 0.690
MDP0000894895 Malus domestica MDP0000894895 I 0.689
Ciclev10005891m.g Citrus clementina Ciclev10005891m.g I 0.689
MTR_3g098580 Medicago truncatula MTR_3g098580 I 0.689
Gorai.008G210600 Gossypium raimondii Gorai.008G210600 I 0.689
Bra022115 Brassica rapa Bra022115 I 0.689
Bo2g132270 Brassica oleracea Bo2g132270 I 0.689
Ca_01387 Cicer arietinum Ca_01387 I 0.689
orange1.1g028566m.g Citrus sinensis orange1.1g028566m.g I 0.689
GRMZM2G016434 Zea mays GRMZM2G016434 I 0.689
PDK_20s1354201g001 Phoenix dactylifera PDK_20s1354201g001 I 0.689
Bostr.14419s0016 Boechera stricta Bostr.14419s0016 I 0.689
SELMODRAFT_73164 Selaginella moellendorffii SELMODRAFT_73164 I 0.688
Bo1g017590 Brassica oleracea Bo1g017590 I 0.688
mgf026054m Mimulus guttatus mgf026054m I 0.688
SELMODRAFT_73169 Selaginella moellendorffii SELMODRAFT_73169 I 0.688
Eucgr.I00292 Eucalyptus grandis Eucgr.I00292 I 0.687
30147.m014331 Ricinus communis 30147.m014331 I 0.687
BRADI3G50490 Brachypodium distachyon BRADI3G50490 I 0.686
Gorai.004G195000 Gossypium raimondii Gorai.004G195000 I 0.685
Gorai.004G195100 Gossypium raimondii Gorai.004G195100 I 0.685
Gorai.004G195200 Gossypium raimondii Gorai.004G195200 I 0.685
29900.m001561 Ricinus communis 29900.m001561 I 0.685
Ciclev10018158m.g Citrus clementina Ciclev10018158m.g I 0.685
Thhalv10027401m.g Eutrema salsugineum Thhalv10027401m.g I 0.685
Gorai.008G232500 Gossypium raimondii Gorai.008G232500 I 0.685
Ca_12775 Cicer arietinum Ca_12775 I 0.685
MTR_2g015050 Medicago truncatula MTR_2g015050 I 0.685
Sb04g033105 Sorghum bicolor Sb04g033105 I 0.684
Pavir.Aa01184 Panicum virgatum Pavir.Aa01184 I 0.684
GRMZM2G466044 Zea mays GRMZM2G466044 I 0.684
Pavir.Ab02556 Panicum virgatum Pavir.Ab02556 I 0.684
TCM_015902 Theobroma cacao TCM_015902 I 0.683
MDP0000668122 Malus domestica MDP0000668122 I 0.682
Bra029302 Brassica rapa Bra029302 I 0.682
Bo2g161710 Brassica oleracea Bo2g161710 I 0.682
scaffold_802838.1 Arabidopsis lyrata scaffold_802838.1 I 0.682
Cagra.4553s0019 Capsella grandiflora Cagra.4553s0019 I 0.682
Bo3g109240 Brassica oleracea Bo3g109240 I 0.682
Thhalv10005416m.g Eutrema salsugineum Thhalv10005416m.g I 0.682
ERF114 Arabidopsis thaliana AT5G61890 I 0.682
Carubv10027012m.g Capsella rubella Carubv10027012m.g I 0.682
Bostr.26833s0047 Boechera stricta Bostr.26833s0047 I 0.682
POPTR_0011s06010 Populus trichocarpa POPTR_0011s06010 I 0.681
LPERR11G03740 Leersia perrieri LPERR11G03740 I 0.681
mgf023779m Mimulus guttatus mgf023779m I 0.681
Gorai.013G186700 Gossypium raimondii Gorai.013G186700 I 0.681
chr4.CM0175.50.nd Lotus japonicus chr4.CM0175.50.nd I 0.680
Solyc03g093610.1 Solanum lycopersicum Solyc03g093610.1 I 0.680
Gorai.007G045100 Gossypium raimondii Gorai.007G045100 I 0.680
Gorai.005G197100 Gossypium raimondii Gorai.005G197100 I 0.680
PGSC0003DMG400010750 Solanum tuberosum PGSC0003DMG400010750 I 0.680
Si017941m.g Setaria italica Si017941m.g I 0.680
TCM_008334 Theobroma cacao TCM_008334 I 0.680
Gorai.008G075600 Gossypium raimondii Gorai.008G075600 I 0.679
Ca_19135 Cicer arietinum Ca_19135 I 0.679
PGSC0003DMG400026260 Solanum tuberosum PGSC0003DMG400026260 I 0.679
Solyc08g078170.1 Solanum lycopersicum Solyc08g078170.1 I 0.679
Thhalv10014575m.g Eutrema salsugineum Thhalv10014575m.g I 0.678
SapurV1A.0107s0450 Salix purpurea SapurV1A.0107s0450 I 0.678
Cucsa.321150 Cucumis sativus Cucsa.321150 I 0.678
Bo2g011200 Brassica oleracea Bo2g011200 I 0.678
Rap2.6L Arabidopsis lyrata fgenesh2_kg.6__1285__AT5G13330.1 I 0.678
Gorai.003G176200 Gossypium raimondii Gorai.003G176200 I 0.678
Bra023404 Brassica rapa Bra023404 I 0.678
SapurV1A.0886s0020 Salix purpurea SapurV1A.0886s0020 I 0.678
Bostr.2902s0068 Boechera stricta Bostr.2902s0068 I 0.678
Carubv10001831m.g Capsella rubella Carubv10001831m.g I 0.678
ERF113 Arabidopsis thaliana AT5G13330 D 0.678
ERF2 Arabidopsis thaliana AT5G47220 D 0.677
TCM_026233 Theobroma cacao TCM_026233 I 0.677
MDP0000322279 Malus domestica MDP0000322279 I 0.677
Gorai.007G281000 Gossypium raimondii Gorai.007G281000 I 0.677
GSMUA_Achr6G27040_001 Musa acuminata GSMUA_Achr6G27040_001 I 0.677
Ca_21773 Cicer arietinum Ca_21773 I 0.677