CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.289.18.1
(
Physcomitrella patens
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
gw1.289.18.1
T007288_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF2_TOBAC
M09727_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF2_01
0.701
0.812
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.289.18.1
AP2
1
52
HFRGVRQRPRGKFAAEIRDPAKQGARLWLGTFDTAEEAAIAYDRAAVRMRGS
Links
Other
AP2
family TFs
Other
Physcomitrella patens
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy