Bostr.5325s0047 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.5325s0047 T007657_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF023
M06560_2.00
Arabidopsis thaliana
DYCACCGACANHDNN

NNHDNTGTCGGTGRH
Dap-seq
OMalley et al.(2016)
AT1G01250_col_a
0.836 0.980
ERF023
M06561_2.00
Arabidopsis thaliana
HHNHHDHCACCGACA

TGTCGGTGDHDDNDD
Dap-seq
OMalley et al.(2016)
AT1G01250_colamp_a
0.836 0.980
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.5325s0047.1.p AP2 44 95

Links

Other AP2 family TFs
Other Boechera stricta TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ERF023 Arabidopsis thaliana AT1G01250 D 0.836
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I 0.743
Cagra.1968s0069 Capsella grandiflora Cagra.1968s0069 I 0.836
mgf020568m Mimulus guttatus mgf020568m I 0.776
cassava43608.valid.m1 Manihot esculenta cassava43608.valid.m1 I 0.752
cassava32974.m1 Manihot esculenta cassava32974.m1 I 0.684
29742.m001400 Ricinus communis 29742.m001400 I 0.797
Pm018354 Prunus mume Pm018354 I 0.801
Ca_17638 Cicer arietinum Ca_17638 I 0.811
Carubv10010347m.g Capsella rubella Carubv10010347m.g I 0.836
Ciclev10022410m.g Citrus clementina Ciclev10022410m.g I 0.795
gene19141-v1.0-hybrid Fragaria vesca gene19141-v1.0-hybrid I 0.805
Gorai.007G109400 Gossypium raimondii Gorai.007G109400 I 0.786
Gorai.008G126000 Gossypium raimondii Gorai.008G126000 I 0.815
orange1.1g029627m.g Citrus sinensis orange1.1g029627m.g I 0.795
SapurV1A.0003s1030 Salix purpurea SapurV1A.0003s1030 I 0.805
SapurV1A.0013s0250 Salix purpurea SapurV1A.0013s0250 I 0.792
Thhalv10009402m.g Eutrema salsugineum Thhalv10009402m.g I 0.816
PK15554.1 Cannabis sativa PK15554.1 I 0.805
Ca_01325 Cicer arietinum Ca_01325 I 0.775
VIT_15s0046g00310 Vitis vinifera VIT_15s0046g00310 I 0.771
TCM_005130 Theobroma cacao TCM_005130 I 0.815
Bo5g002600 Brassica oleracea Bo5g002600 I 0.816
Bo8g117810 Brassica oleracea Bo8g117810 I 0.812
Bra032630 Brassica rapa Bra032630 I 0.832
Bra033274 Brassica rapa Bra033274 I 0.816
fgenesh2_kg.1__103__AT1G01250.1 Arabidopsis lyrata fgenesh2_kg.1__103__AT1G01250.1 I 0.836
GLYMA03G41910 Glycine max GLYMA03G41910 I 0.786
GLYMA07G06080 Glycine max GLYMA07G06080 I 0.772
GLYMA16G02680 Glycine max GLYMA16G02680 I 0.781
GLYMA19G44580 Glycine max GLYMA19G44580 I 0.795
MTR_7g117690 Medicago truncatula MTR_7g117690 I 0.796
MTR_8g027465 Medicago truncatula MTR_8g027465 I 0.803
POPTR_0002s17320 Populus trichocarpa POPTR_0002s17320 I 0.792
POPTR_0002s17330 Populus trichocarpa POPTR_0002s17330 I 0.792
POPTR_0014s09540 Populus trichocarpa POPTR_0014s09540 I 0.797
POPTR_0855s00200 Populus trichocarpa POPTR_0855s00200 I 0.792
PRUPE_ppa026139mg Prunus persica PRUPE_ppa026139mg I 0.801
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.677
chr1.LjT43L07.200.nd Lotus japonicus chr1.LjT43L07.200.nd I 0.805