Cagra.0914s0005 (Capsella grandiflora)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cagra.0914s0005 T007716_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0914s0005.1.p AP2 70 130

Links

Other AP2 family TFs
Other Capsella grandiflora TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cucsa.353040 Cucumis sativus Cucsa.353040 I 0.759
mgf017600m Mimulus guttatus mgf017600m N 0.847
mgf019897m Mimulus guttatus mgf019897m N 0.872
Aquca_009_00241 Aquilegia coerulea Aquca_009_00241 N 0.914
Bostr.11568s0008 Boechera stricta Bostr.11568s0008 N 0.887
Carubv10023272m.g Capsella rubella Carubv10023272m.g N 0.887
Ciclev10005012m.g Citrus clementina Ciclev10005012m.g N 0.946
Eucgr.A02341 Eucalyptus grandis Eucgr.A02341 N 0.946
evm.TU.supercontig_129.70 Carica papaya evm.TU.supercontig_129.70 N 0.698
BBM Vitis vinifera VIT_04s0023g00950 N 0.712
Cucsa.338170 Cucumis sativus Cucsa.338170 N 0.932
VIT_08s0007g08580 Vitis vinifera VIT_08s0007g08580 N 0.887
Ca_07237 Cicer arietinum Ca_07237 N 0.946
Cla022214 Citrullus lanatus Cla022214 N 0.709
30006.m000282 Ricinus communis 30006.m000282 N 0.887
30170.m013669 Ricinus communis 30170.m013669 N 0.766
cassava19560.m1 Manihot esculenta cassava19560.m1 N 0.797
cassava40681.m1 Manihot esculenta cassava40681.m1 N 0.677
cassava421.valid.m1 Manihot esculenta cassava421.valid.m1 N 0.887
evm.TU.supercontig_224.4 Carica papaya evm.TU.supercontig_224.4 N 0.946
evm.TU.supercontig_99.39 Carica papaya evm.TU.supercontig_99.39 N 0.712
gene02470-v1.0-hybrid Fragaria vesca gene02470-v1.0-hybrid N 0.887
SapurV1A.0037s0030 Salix purpurea SapurV1A.0037s0030 N 0.856
SapurV1A.3066s0020 Salix purpurea SapurV1A.3066s0020 N 0.946
Thhalv10016812m.g Eutrema salsugineum Thhalv10016812m.g N 0.946
PK12273.1 Cannabis sativa PK12273.1 N 0.946
PK15670.1 Cannabis sativa PK15670.1 N 0.772
PK18855.1 Cannabis sativa PK18855.1 N 0.894
chr3.CM0452.130.nd Lotus japonicus chr3.CM0452.130.nd N 0.737
LjSGA_012098.1 Lotus japonicus LjSGA_012098.1 N 0.824
Pavir.Cb01456 Panicum virgatum Pavir.Cb01456 N 0.938
Pavir.Ca01410 Panicum virgatum Pavir.Ca01410 N 0.938
Gorai.003G091500 Gossypium raimondii Gorai.003G091500 N 0.946
Lus10000965.g Linum usitatissimum Lus10000965.g N 0.887
Lus10011730.g Linum usitatissimum Lus10011730.g N 0.691
Lus10039650.g Linum usitatissimum Lus10039650.g N 0.691
Lus10040140.g Linum usitatissimum Lus10040140.g N 0.887
MDP0000314518 Malus domestica MDP0000314518 N 0.887
MDP0000803527 Malus domestica MDP0000803527 N 0.743
orange1.1g018292m.g Citrus sinensis orange1.1g018292m.g N 0.946
PDK_20s1313371g002 Phoenix dactylifera PDK_20s1313371g002 N 0.766
TRIUR3_07433 Triticum urartu TRIUR3_07433 N 0.878
AMTR_s00159p00062070 Amborella trichopoda AMTR_s00159p00062070 N 0.854
GLYMA03G29240 Glycine max GLYMA03G29240 N 0.946
GLYMA19G31960 Glycine max GLYMA19G31960 N 0.946
GRMZM2G013657 Zea mays GRMZM2G013657 N 0.938
GRMZM2G146688 Zea mays GRMZM2G146688 N 0.768
LPERR05G11930 Leersia perrieri LPERR05G11930 N 0.878
MLOC_7325 Hordeum vulgare MLOC_7325 N 0.938
MTR_7g091390 Medicago truncatula MTR_7g091390 N 0.887
OB03G42600 Oryza brachyantha OB03G42600 N 0.701
GLYMA02G33090 Glycine max GLYMA02G33090 N 0.939
fgenesh2_kg.4__2311__AT2G41710.2 Arabidopsis lyrata fgenesh2_kg.4__2311__AT2G41710.2 N 0.946
AT2G41710 Arabidopsis thaliana AT2G41710 N 0.946
BGIOSGA019793 Oryza indica BGIOSGA019793 N 0.878
BGIOSGA023402 Oryza indica BGIOSGA023402 N 0.720
Bo3g035770 Brassica oleracea Bo3g035770 N 0.887
Bo4g013420 Brassica oleracea Bo4g013420 N 0.946
Bra004641 Brassica rapa Bra004641 N 0.946
BRADI2G26987 Brachypodium distachyon BRADI2G26987 N 0.878
F775_10869 Aegilops tauschii F775_10869 N 0.878
OB05G22940 Oryza brachyantha OB05G22940 N 0.878
OB06G31060 Oryza brachyantha OB06G31060 N 0.720
OBART05G15060 Oryza barthii OBART05G15060 N 0.878
ORUFI05G16140 Oryza rufipogon ORUFI05G16140 N 0.878
POPTR_0006s04820 Populus trichocarpa POPTR_0006s04820 N 0.887
POPTR_0016s05670 Populus trichocarpa POPTR_0016s05670 N 0.887
PRUPE_ppa006202mg Prunus persica PRUPE_ppa006202mg N 0.887
Sb09g019190 Sorghum bicolor Sb09g019190 N 0.878
Si021952m.g Setaria italica Si021952m.g N 0.938
Solyc02g030210.2 Solanum lycopersicum Solyc02g030210.2 N 0.813
TCM_024554 Theobroma cacao TCM_024554 N 0.946
ORGLA05G0129100 Oryza glaberrima ORGLA05G0129100 N 0.938
OPUNC05G13110 Oryza punctata OPUNC05G13110 N 0.878
OBART06G23380 Oryza barthii OBART06G23380 N 0.720
OGLUM05G15890 Oryza glumaepatula OGLUM05G15890 N 0.878
OGLUM06G03000 Oryza glumaepatula OGLUM06G03000 N 0.828
OLONG_002212 Oryza longistaminata OLONG_002212 N 0.720
OLONG_020459 Oryza longistaminata OLONG_020459 N 0.878
OMERI05G13370 Oryza meridionalis OMERI05G13370 N 0.878
OMERI06G23370 Oryza meridionalis OMERI06G23370 N 0.720
ONIVA05G15390 Oryza nivara ONIVA05G15390 N 0.878
Traes_6AS_53FA034C9 Triticum aestivum Traes_6AS_53FA034C9 N 0.821