gene04911-v1.0-hybrid (Fragaria vesca)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gene04911-v1.0-hybrid T008360_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF106
M01628_2.00 		Arabidopsis thaliana
NNNVCRVCN
NGBYGBNNN		 PBM
Weirauch et al.(2014)
pTH7426 		0.700 0.673
ERF14
M01045_2.00 		Arabidopsis thaliana
NVGCCGNCN
NGNCGGCBN		 PBM
Sullivan et al.(2014)
pTH9793 		0.683 0.692
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna04911.1-v1.0-hybrid AP2 89 141

Links

Other AP2 family TFs
Other Fragaria vesca TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_005704 Theobroma cacao TCM_005704 I 0.760
Gorai.008G108600 Gossypium raimondii Gorai.008G108600 I 0.753
mgf019541m Mimulus guttatus mgf019541m I 0.747
Bostr.25993s0288 Boechera stricta Bostr.25993s0288 I 0.747
SapurV1A.0124s0180 Salix purpurea SapurV1A.0124s0180 I 0.747
Gorai.007G086100 Gossypium raimondii Gorai.007G086100 I 0.740
PGSC0003DMG400007027 Solanum tuberosum PGSC0003DMG400007027 I 0.739
PGSC0003DMG400026046 Solanum tuberosum PGSC0003DMG400026046 I 0.737
Solyc05g050790.1 Solanum lycopersicum Solyc05g050790.1 I 0.736
PGSC0003DMG400016004 Solanum tuberosum PGSC0003DMG400016004 I 0.734
Solyc05g052030.1 Solanum lycopersicum Solyc05g052030.1 I 0.732
VIT_05s0049g00500 Vitis vinifera VIT_05s0049g00500 I 0.731
Solyc01g090370.1 Solanum lycopersicum Solyc01g090370.1 I 0.730
Lus10013959.g Linum usitatissimum Lus10013959.g I 0.730
TCM_014850 Theobroma cacao TCM_014850 I 0.729
PGSC0003DMG400026049 Solanum tuberosum PGSC0003DMG400026049 I 0.722
SapurV1A.0007s0970 Salix purpurea SapurV1A.0007s0970 I 0.719
Cla021384 Citrullus lanatus Cla021384 I 0.718
MTR_1g090290 Medicago truncatula MTR_1g090290 I 0.717
30147.m014329 Ricinus communis 30147.m014329 I 0.717
Bo7g077390 Brassica oleracea Bo7g077390 I 0.716
PGSC0003DMG400036566 Solanum tuberosum PGSC0003DMG400036566 I 0.714
Gorai.001G051100 Gossypium raimondii Gorai.001G051100 I 0.713
GSMUA_Achr1G00490_001 Musa acuminata GSMUA_Achr1G00490_001 I 0.712
Ca_20349 Cicer arietinum Ca_20349 I 0.712
GLYMA20G33800 Glycine max GLYMA20G33800 I 0.710
mgf021756m Mimulus guttatus mgf021756m I 0.710
Cucsa.129330 Cucumis sativus Cucsa.129330 I 0.708
Cla003678 Citrullus lanatus Cla003678 I 0.708
MDP0000180950 Malus domestica MDP0000180950 I 0.707
GLYMA10G33810 Glycine max GLYMA10G33810 I 0.707
Lus10016211.g Linum usitatissimum Lus10016211.g I 0.706
MTR_1g040430 Medicago truncatula MTR_1g040430 I 0.705
GLYMA03G26530 Glycine max GLYMA03G26530 I 0.704
Bo7g098850 Brassica oleracea Bo7g098850 I 0.704
mgf025885m Mimulus guttatus mgf025885m I 0.704
Bra012939 Brassica rapa Bra012939 I 0.704
POPTR_0003s15060 Populus trichocarpa POPTR_0003s15060 I 0.704
Eucgr.K00128 Eucalyptus grandis Eucgr.K00128 I 0.703
Gorai.007G046100 Gossypium raimondii Gorai.007G046100 I 0.703
GLYMA03G26310 Glycine max GLYMA03G26310 I 0.703
Bo9g069400 Brassica oleracea Bo9g069400 I 0.701
Bra017495 Brassica rapa Bra017495 I 0.701
PK01935.1 Cannabis sativa PK01935.1 I 0.701
Bostr.26833s0077 Boechera stricta Bostr.26833s0077 I 0.700
Cagra.0542s0054 Capsella grandiflora Cagra.0542s0054 I 0.700
Carubv10001989m.g Capsella rubella Carubv10001989m.g I 0.700
Cagra.2925s0026 Capsella grandiflora Cagra.2925s0026 I 0.700
Thhalv10005285m.g Eutrema salsugineum Thhalv10005285m.g I 0.700
Bra009250 Brassica rapa Bra009250 I 0.700
Bo9g175610 Brassica oleracea Bo9g175610 I 0.700
Thhalv10014666m.g Eutrema salsugineum Thhalv10014666m.g I 0.700
Carubv10027835m.g Capsella rubella Carubv10027835m.g I 0.700
Bostr.13129s0205 Boechera stricta Bostr.13129s0205 I 0.700
Bra035919 Brassica rapa Bra035919 I 0.700
Bo9g014660 Brassica oleracea Bo9g014660 I 0.700
fgenesh2_kg.8__2142__AT5G61590.1 Arabidopsis lyrata fgenesh2_kg.8__2142__AT5G61590.1 I 0.700
ERF106 Arabidopsis thaliana AT5G07580 D 0.700
SapurV1A.0059s0650 Salix purpurea SapurV1A.0059s0650 I 0.700
ERF107 Arabidopsis thaliana AT5G61590 I 0.700
POPTR_0001s11800 Populus trichocarpa POPTR_0001s11800 I 0.700
SapurV1A.1065s0040 Salix purpurea SapurV1A.1065s0040 I 0.700
scaffold_600764.1 Arabidopsis lyrata scaffold_600764.1 I 0.700
Solyc01g090300.2 Solanum lycopersicum Solyc01g090300.2 I 0.699
GLYMA20G16920 Glycine max GLYMA20G16920 I 0.697
GLYMA10G23460 Glycine max GLYMA10G23460 I 0.697
Bra028690 Brassica rapa Bra028690 I 0.697
evm.TU.supercontig_101.16 Carica papaya evm.TU.supercontig_101.16 I 0.696
orange1.1g030002m.g Citrus sinensis orange1.1g030002m.g I 0.696
Ciclev10005863m.g Citrus clementina Ciclev10005863m.g I 0.696
Solyc01g090310.2 Solanum lycopersicum Solyc01g090310.2 I 0.695
PGSC0003DMG400041045 Solanum tuberosum PGSC0003DMG400041045 I 0.695
GRMZM2G021790 Zea mays GRMZM2G021790 I 0.694
cassava4507.m1 Manihot esculenta cassava4507.m1 I 0.693
VIT_07s0005g03280 Vitis vinifera VIT_07s0005g03280 I 0.693
Bo8g115580 Brassica oleracea Bo8g115580 I 0.692
Bra032512 Brassica rapa Bra032512 I 0.692
Si032351m.g Setaria italica Si032351m.g I 0.692
PK26398.1 Cannabis sativa PK26398.1 I 0.692
chr5.CM0909.360.nc Lotus japonicus chr5.CM0909.360.nc I 0.692
MDP0000517262 Malus domestica MDP0000517262 I 0.691
PRUPE_ppa022802mg Prunus persica PRUPE_ppa022802mg I 0.691
Pm019544 Prunus mume Pm019544 I 0.691
gene21167-v1.0-hybrid Fragaria vesca gene21167-v1.0-hybrid I 0.690
gene04916-v1.0-hybrid Fragaria vesca gene04916-v1.0-hybrid I 0.687
Gorai.001G252400 Gossypium raimondii Gorai.001G252400 I 0.686
Pm017698 Prunus mume Pm017698 I 0.686
Ciclev10023352m.g Citrus clementina Ciclev10023352m.g I 0.686
SapurV1A.0012s0890 Salix purpurea SapurV1A.0012s0890 I 0.686
PRUPE_ppa023698mg Prunus persica PRUPE_ppa023698mg I 0.686
orange1.1g043029m.g Citrus sinensis orange1.1g043029m.g I 0.686
POPTR_0004s05100 Populus trichocarpa POPTR_0004s05100 I 0.686
GLYMA07G13980 Glycine max GLYMA07G13980 I 0.686
MDP0000122665 Malus domestica MDP0000122665 I 0.686
MDP0000135205 Malus domestica MDP0000135205 I 0.686
Solyc03g093560.1 Solanum lycopersicum Solyc03g093560.1 I 0.685
Solyc03g093540.1 Solanum lycopersicum Solyc03g093540.1 I 0.685
PGSC0003DMG400010753 Solanum tuberosum PGSC0003DMG400010753 I 0.685
PGSC0003DMG400040046 Solanum tuberosum PGSC0003DMG400040046 I 0.685
evm.TU.supercontig_13.253 Carica papaya evm.TU.supercontig_13.253 I 0.685
Solyc03g093550.1 Solanum lycopersicum Solyc03g093550.1 I 0.685
Cla010887 Citrullus lanatus Cla010887 I 0.685
Cucsa.094100 Cucumis sativus Cucsa.094100 I 0.685
Carubv10027063m.g Capsella rubella Carubv10027063m.g I 0.684
cassava21353.m1 Manihot esculenta cassava21353.m1 I 0.684
orange1.1g048608m.g Citrus sinensis orange1.1g048608m.g I 0.684
Ciclev10006784m.g Citrus clementina Ciclev10006784m.g I 0.684
cassava44000.valid.m1 Manihot esculenta cassava44000.valid.m1 I 0.684
Gorai.008G108400 Gossypium raimondii Gorai.008G108400 I 0.683
Bo5g004520 Brassica oleracea Bo5g004520 I 0.683
ERF14 Arabidopsis thaliana AT1G04370 D 0.683
ATERF14 Arabidopsis lyrata scaffold_100393.1 I 0.683
Solyc03g005520.1 Solanum lycopersicum Solyc03g005520.1 I 0.683
PGSC0003DMG400013402 Solanum tuberosum PGSC0003DMG400013402 I 0.683
Thhalv10009418m.g Eutrema salsugineum Thhalv10009418m.g I 0.683
Pm017700 Prunus mume Pm017700 I 0.683
Bra015310 Brassica rapa Bra015310 I 0.683
PGSC0003DMG400014204 Solanum tuberosum PGSC0003DMG400014204 I 0.683
Carubv10011057m.g Capsella rubella Carubv10011057m.g I 0.682
Cagra.1671s0052 Capsella grandiflora Cagra.1671s0052 I 0.682
Bostr.26675s0318 Boechera stricta Bostr.26675s0318 I 0.682
VIT_10s0003g00580 Vitis vinifera VIT_10s0003g00580 I 0.681
Ca_02325 Cicer arietinum Ca_02325 I 0.681
cassava1608.valid.m1 Manihot esculenta cassava1608.valid.m1 I 0.681
orange1.1g031071m.g Citrus sinensis orange1.1g031071m.g I 0.679
PK23186.1 Cannabis sativa PK23186.1 I 0.679
PGSC0003DMG400040573 Solanum tuberosum PGSC0003DMG400040573 I 0.679
Lus10025430.g Linum usitatissimum Lus10025430.g I 0.679
Solyc05g052040.1 Solanum lycopersicum Solyc05g052040.1 I 0.679
Ciclev10016995m.g Citrus clementina Ciclev10016995m.g I 0.679
Ca_00359 Cicer arietinum Ca_00359 I 0.679
Cagra.3782s0036 Capsella grandiflora Cagra.3782s0036 I 0.679
29900.m001559 Ricinus communis 29900.m001559 I 0.678
GRMZM2G317596 Zea mays GRMZM2G317596 I 0.678
VIT_16s0013g01000 Vitis vinifera VIT_16s0013g01000 I 0.678
VIT_15s0021g01600 Vitis vinifera VIT_15s0021g01600 I 0.678
Cla015064 Citrullus lanatus Cla015064 I 0.678
VIT_15s0021g01590 Vitis vinifera VIT_15s0021g01590 I 0.678
VIT_16s0013g01110 Vitis vinifera VIT_16s0013g01110 I 0.678
Gorai.001G051200 Gossypium raimondii Gorai.001G051200 I 0.678
VIT_15s0021g01610 Vitis vinifera VIT_15s0021g01610 I 0.678
CM0905.90.nd Lotus japonicus CM0905.90.nd I 0.677
Eucgr.E03168 Eucalyptus grandis Eucgr.E03168 I 0.677
Eucgr.E02651 Eucalyptus grandis Eucgr.E02651 I 0.677