MDP0000289945 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000289945 T009079_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF115
M06657_2.00
Arabidopsis thaliana
CCGCCGYMRYHDCCR

YGGHDRYKRCGGCGG
Dap-seq
OMalley et al.(2016)
ERF115_col_a
0.704 0.880
ERF115
M06658_2.00
Arabidopsis thaliana
CKCCGCCGYMRYHDY

RHDRYKRCGGCGGMG
Dap-seq
OMalley et al.(2016)
ERF115_colamp_a
0.704 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000289945 AP2 224 275

Links

Other AP2 family TFs
Other Malus domestica TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDP0000668122 Malus domestica MDP0000668122 I 0.758
GRMZM2G016434 Zea mays GRMZM2G016434 I 0.730
Si018024m.g Setaria italica Si018024m.g I 0.730
OBART02G18470 Oryza barthii OBART02G18470 I 0.729
gene06406-v1.0-hybrid Fragaria vesca gene06406-v1.0-hybrid I 0.729
ONIVA02G20490 Oryza nivara ONIVA02G20490 I 0.726
Sb04g021160 Sorghum bicolor Sb04g021160 I 0.726
Pavir.Aa02595 Panicum virgatum Pavir.Aa02595 I 0.726
OPUNC02G16450 Oryza punctata OPUNC02G16450 I 0.726
ORUFI02G19470 Oryza rufipogon ORUFI02G19470 I 0.726
BGIOSGA006362 Oryza indica BGIOSGA006362 I 0.726
Lus10022426.g Linum usitatissimum Lus10022426.g I 0.711
Ciclev10032575m.g Citrus clementina Ciclev10032575m.g I 0.711
30147.m014403 Ricinus communis 30147.m014403 I 0.711
orange1.1g036963m.g Citrus sinensis orange1.1g036963m.g I 0.711
cassava10717.m1 Manihot esculenta cassava10717.m1 I 0.709
evm.TU.supercontig_13.175 Carica papaya evm.TU.supercontig_13.175 I 0.709
TCM_017352 Theobroma cacao TCM_017352 I 0.708
Cla019618 Citrullus lanatus Cla019618 I 0.708
Cucsa.156890 Cucumis sativus Cucsa.156890 I 0.708
GLYMA16G05190 Glycine max GLYMA16G05190 I 0.708
Solyc12g042210.1 Solanum lycopersicum Solyc12g042210.1 I 0.708
GLYMA19G27790 Glycine max GLYMA19G27790 I 0.708
fgenesh2_kg.6__690__AT5G07310.1 Arabidopsis lyrata fgenesh2_kg.6__690__AT5G07310.1 I 0.706
orange1.1g005229m.g Citrus sinensis orange1.1g005229m.g I 0.706
Thhalv10015583m.g Eutrema salsugineum Thhalv10015583m.g I 0.706
Ciclev10003903m.g Citrus clementina Ciclev10003903m.g I 0.706
Bostr.13129s0235 Boechera stricta Bostr.13129s0235 I 0.706
Bra009272 Brassica rapa Bra009272 I 0.706
Cagra.2662s0009 Capsella grandiflora Cagra.2662s0009 I 0.706
Bo9g175390 Brassica oleracea Bo9g175390 I 0.706
Carubv10002723m.g Capsella rubella Carubv10002723m.g I 0.706
30131.m006971 Ricinus communis 30131.m006971 I 0.705
chr1.CM1880.220.nd Lotus japonicus chr1.CM1880.220.nd I 0.705
cassava45576.m1 Manihot esculenta cassava45576.m1 I 0.705
ERF115 Arabidopsis thaliana AT5G07310 D 0.704
Cucsa.349200 Cucumis sativus Cucsa.349200 I 0.704
LPERR02G14620 Leersia perrieri LPERR02G14620 I 0.704
Cla007205 Citrullus lanatus Cla007205 I 0.704
Bra005932 Brassica rapa Bra005932 I 0.704
GSMUA_Achr10G09560_001 Musa acuminata GSMUA_Achr10G09560_001 I 0.703
Bo2g008570 Brassica oleracea Bo2g008570 I 0.703
Aquca_043_00039 Aquilegia coerulea Aquca_043_00039 I 0.701
GLYMA16G26320 Glycine max GLYMA16G26320 I 0.701
SapurV1A.0826s0010 Salix purpurea SapurV1A.0826s0010 I 0.701
GLYMA02G07310 Glycine max GLYMA02G07310 I 0.701
gene06407-v1.0-hybrid Fragaria vesca gene06407-v1.0-hybrid I 0.698
TCM_014762 Theobroma cacao TCM_014762 I 0.698
SapurV1A.0517s0130 Salix purpurea SapurV1A.0517s0130 I 0.698
GLYMA06G17180 Glycine max GLYMA06G17180 I 0.698
POPTR_0012s11030 Populus trichocarpa POPTR_0012s11030 I 0.698
chr1.CM0094.670.nd Lotus japonicus chr1.CM0094.670.nd I 0.698
cassava19959.m1 Manihot esculenta cassava19959.m1 I 0.698
Bo3g004290 Brassica oleracea Bo3g004290 I 0.697
MDP0000894895 Malus domestica MDP0000894895 I 0.694
MTR_3g098580 Medicago truncatula MTR_3g098580 I 0.694
Ca_01387 Cicer arietinum Ca_01387 I 0.694
Gorai.008G210600 Gossypium raimondii Gorai.008G210600 I 0.694
PRUPE_ppa008772mg Prunus persica PRUPE_ppa008772mg I 0.694
VIT_14s0068g01040 Vitis vinifera VIT_14s0068g01040 I 0.693
Pm024604 Prunus mume Pm024604 I 0.692
Ciclev10018158m.g Citrus clementina Ciclev10018158m.g I 0.688
chr4.CM0175.50.nd Lotus japonicus chr4.CM0175.50.nd I 0.687
Ca_21773 Cicer arietinum Ca_21773 I 0.687
29900.m001561 Ricinus communis 29900.m001561 I 0.686
Gorai.009G255400 Gossypium raimondii Gorai.009G255400 I 0.686
cassava40570.m1 Manihot esculenta cassava40570.m1 I 0.686
Gorai.007G045100 Gossypium raimondii Gorai.007G045100 I 0.684
Ca_19135 Cicer arietinum Ca_19135 I 0.684
MDP0000190237 Malus domestica MDP0000190237 I 0.680
OPUNC05G15760 Oryza punctata OPUNC05G15760 I 0.679
LPERR05G14130 Leersia perrieri LPERR05G14130 I 0.679
Lus10028679.g Linum usitatissimum Lus10028679.g I 0.679
SapurV1A.3099s0010 Salix purpurea SapurV1A.3099s0010 I 0.679
Cagra.14503s0008 Capsella grandiflora Cagra.14503s0008 I 0.679
GRMZM2G457562 Zea mays GRMZM2G457562 I 0.679
mgf000075m Mimulus guttatus mgf000075m I 0.677