CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000289945
(
Malus domestica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
MDP0000289945
T009079_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF115
M06657_2.00
Arabidopsis thaliana
CCGCCGYMRYHDCCR
YGGHDRYKRCGGCGG
Dap-seq
OMalley et al.(2016)
ERF115_col_a
0.704
0.880
ERF115
M06658_2.00
Arabidopsis thaliana
CKCCGCCGYMRYHDY
RHDRYKRCGGCGGMG
Dap-seq
OMalley et al.(2016)
ERF115_colamp_a
0.704
0.880
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000289945
AP2
224
275
QHYRGVRRRPSGKWAAEIRDPVKAARVWLGTFDTAEAAALAYDKAALKFKGS
Links
Other
AP2
family TFs
Other
Malus domestica
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000668122
Malus domestica
MDP0000668122
I
0.758
GRMZM2G016434
Zea mays
GRMZM2G016434
I
0.730
Si018024m.g
Setaria italica
Si018024m.g
I
0.730
OBART02G18470
Oryza barthii
OBART02G18470
I
0.729
gene06406-v1.0-hybrid
Fragaria vesca
gene06406-v1.0-hybrid
I
0.729
ONIVA02G20490
Oryza nivara
ONIVA02G20490
I
0.726
Sb04g021160
Sorghum bicolor
Sb04g021160
I
0.726
Pavir.Aa02595
Panicum virgatum
Pavir.Aa02595
I
0.726
OPUNC02G16450
Oryza punctata
OPUNC02G16450
I
0.726
ORUFI02G19470
Oryza rufipogon
ORUFI02G19470
I
0.726
BGIOSGA006362
Oryza indica
BGIOSGA006362
I
0.726
Lus10022426.g
Linum usitatissimum
Lus10022426.g
I
0.711
Ciclev10032575m.g
Citrus clementina
Ciclev10032575m.g
I
0.711
30147.m014403
Ricinus communis
30147.m014403
I
0.711
orange1.1g036963m.g
Citrus sinensis
orange1.1g036963m.g
I
0.711
cassava10717.m1
Manihot esculenta
cassava10717.m1
I
0.709
evm.TU.supercontig_13.175
Carica papaya
evm.TU.supercontig_13.175
I
0.709
TCM_017352
Theobroma cacao
TCM_017352
I
0.708
Cla019618
Citrullus lanatus
Cla019618
I
0.708
Cucsa.156890
Cucumis sativus
Cucsa.156890
I
0.708
GLYMA16G05190
Glycine max
GLYMA16G05190
I
0.708
Solyc12g042210.1
Solanum lycopersicum
Solyc12g042210.1
I
0.708
GLYMA19G27790
Glycine max
GLYMA19G27790
I
0.708
fgenesh2_kg.6__690__AT5G07310.1
Arabidopsis lyrata
fgenesh2_kg.6__690__AT5G07310.1
I
0.706
orange1.1g005229m.g
Citrus sinensis
orange1.1g005229m.g
I
0.706
Thhalv10015583m.g
Eutrema salsugineum
Thhalv10015583m.g
I
0.706
Ciclev10003903m.g
Citrus clementina
Ciclev10003903m.g
I
0.706
Bostr.13129s0235
Boechera stricta
Bostr.13129s0235
I
0.706
Bra009272
Brassica rapa
Bra009272
I
0.706
Cagra.2662s0009
Capsella grandiflora
Cagra.2662s0009
I
0.706
Bo9g175390
Brassica oleracea
Bo9g175390
I
0.706
Carubv10002723m.g
Capsella rubella
Carubv10002723m.g
I
0.706
30131.m006971
Ricinus communis
30131.m006971
I
0.705
chr1.CM1880.220.nd
Lotus japonicus
chr1.CM1880.220.nd
I
0.705
cassava45576.m1
Manihot esculenta
cassava45576.m1
I
0.705
ERF115
Arabidopsis thaliana
AT5G07310
D
0.704
Cucsa.349200
Cucumis sativus
Cucsa.349200
I
0.704
LPERR02G14620
Leersia perrieri
LPERR02G14620
I
0.704
Cla007205
Citrullus lanatus
Cla007205
I
0.704
Bra005932
Brassica rapa
Bra005932
I
0.704
GSMUA_Achr10G09560_001
Musa acuminata
GSMUA_Achr10G09560_001
I
0.703
Bo2g008570
Brassica oleracea
Bo2g008570
I
0.703
Aquca_043_00039
Aquilegia coerulea
Aquca_043_00039
I
0.701
GLYMA16G26320
Glycine max
GLYMA16G26320
I
0.701
SapurV1A.0826s0010
Salix purpurea
SapurV1A.0826s0010
I
0.701
GLYMA02G07310
Glycine max
GLYMA02G07310
I
0.701
gene06407-v1.0-hybrid
Fragaria vesca
gene06407-v1.0-hybrid
I
0.698
TCM_014762
Theobroma cacao
TCM_014762
I
0.698
SapurV1A.0517s0130
Salix purpurea
SapurV1A.0517s0130
I
0.698
GLYMA06G17180
Glycine max
GLYMA06G17180
I
0.698
POPTR_0012s11030
Populus trichocarpa
POPTR_0012s11030
I
0.698
chr1.CM0094.670.nd
Lotus japonicus
chr1.CM0094.670.nd
I
0.698
cassava19959.m1
Manihot esculenta
cassava19959.m1
I
0.698
Bo3g004290
Brassica oleracea
Bo3g004290
I
0.697
MDP0000894895
Malus domestica
MDP0000894895
I
0.694
MTR_3g098580
Medicago truncatula
MTR_3g098580
I
0.694
Ca_01387
Cicer arietinum
Ca_01387
I
0.694
Gorai.008G210600
Gossypium raimondii
Gorai.008G210600
I
0.694
PRUPE_ppa008772mg
Prunus persica
PRUPE_ppa008772mg
I
0.694
VIT_14s0068g01040
Vitis vinifera
VIT_14s0068g01040
I
0.693
Pm024604
Prunus mume
Pm024604
I
0.692
Ciclev10018158m.g
Citrus clementina
Ciclev10018158m.g
I
0.688
chr4.CM0175.50.nd
Lotus japonicus
chr4.CM0175.50.nd
I
0.687
Ca_21773
Cicer arietinum
Ca_21773
I
0.687
29900.m001561
Ricinus communis
29900.m001561
I
0.686
Gorai.009G255400
Gossypium raimondii
Gorai.009G255400
I
0.686
cassava40570.m1
Manihot esculenta
cassava40570.m1
I
0.686
Gorai.007G045100
Gossypium raimondii
Gorai.007G045100
I
0.684
Ca_19135
Cicer arietinum
Ca_19135
I
0.684
MDP0000190237
Malus domestica
MDP0000190237
I
0.680
OPUNC05G15760
Oryza punctata
OPUNC05G15760
I
0.679
LPERR05G14130
Leersia perrieri
LPERR05G14130
I
0.679
Lus10028679.g
Linum usitatissimum
Lus10028679.g
I
0.679
SapurV1A.3099s0010
Salix purpurea
SapurV1A.3099s0010
I
0.679
Cagra.14503s0008
Capsella grandiflora
Cagra.14503s0008
I
0.679
GRMZM2G457562
Zea mays
GRMZM2G457562
I
0.679
mgf000075m
Mimulus guttatus
mgf000075m
I
0.677