ENSBTAP00000001651-D1 (Bos grunniens)
AP-2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03299 (TF_AP-2) IPR013854 ENSBTAP00000001651-D1 T011167_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TFAP2A
M02762_2.00
Homo sapiens
HGCCYBVRGGSD

HSCCYBVRGGCD
SELEX
Jolma et al.(2013)
TFAP2A_1
0.944 0.944
TFAP2A
M02763_2.00
Homo sapiens
HGCCYSMGGCN

NGCCKSRGGCD
SELEX
Jolma et al.(2013)
TFAP2A_2
0.944 0.944
TFAP2A
M02764_2.00
Homo sapiens
NSCCCBNVRGGSN

NSCCYBNVGGGSN
SELEX
Jolma et al.(2013)
TFAP2A_3
0.944 0.944
TFAP2A
M02765_2.00
Homo sapiens
HGCCTSRGGCD

HGCCYSAGGCD
SELEX
Jolma et al.(2013)
TFAP2A_4
0.944 0.944
TFAP2A
M02766_2.00
Homo sapiens
HGCCYBVRGGCD

HGCCYBVRGGCD
SELEX
Jolma et al.(2013)
TFAP2A_5
0.944 0.944
TFAP2A
M02767_2.00
Homo sapiens
WGCCCYNVGGGCD

HGCCCBNRGGGCW
SELEX
Jolma et al.(2013)
TFAP2A_6
0.944 0.944
TFAP2A
M04054_2.00
Homo sapiens
NGCCBSVGGCN

NGCCBSVGGCN
SELEX
Yin et al.(2017)
TFAP2A_FL_HT-SELEX
0.944 0.944
TFAP2A
M07784_2.00
Homo sapiens
NBNSCCYSRGGSCWN

NWGSCCYSRGGSNVN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_AP2ALPHA_UCD
0.944 0.944
TFAP2A
M08703_2.00
Homo sapiens
NHDSCCYCAGGSHWN

NWDSCCTGRGGSHDN
Misc
Kulakovskiy et al.(2013)
AP2A_HUMAN.H11MO.0.A
0.944 0.944
TFAP2A
M09755_2.00
Homo sapiens
GCCBBVVGS

SCBBVVGGC
Transfac
Matys et al.(2006)
V$AP2ALPHA_01
0.944 0.944
TFAP2A
M09756_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP2ALPHA_02
0.944 0.944
TFAP2A
M09757_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP2ALPHA_03
0.944 0.944
TFAP2A
M09758_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP2ALPHA_Q4
0.944 0.944
TFAP2A
M09759_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP2ALPHA_Q6
0.944 0.944
TFAP2A
M09760_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFAP2A_09
0.944 0.944
TFAP2A
M04055_2.00
Homo sapiens
NSCCTNAGGSN

NSCCTNAGGSN
SELEX
Yin et al.(2017)
TFAP2A_FL_Methyl-HT-SELEX
0.944 0.944
Tfap2a
M00111_2.00
Mus musculus
HSCCBNVRGS

SCYBNVGGSD
PBM
Badis et al.(2009)
Tcfap2a_2337
0.938 0.938
Tfap2a
M02768_2.00
Mus musculus
HGCCYBVRGGCR

YGCCYBVRGGCD
SELEX
Jolma et al.(2013)
Tcfap2a_1
0.938 0.938
Tfap2a
M02769_2.00
Mus musculus
HGCCTSRGGCD

HGCCYSAGGCD
SELEX
Jolma et al.(2013)
Tcfap2a_2
0.938 0.938
Tfap2a
M02770_2.00
Mus musculus
WGCCCYBVGGGCD

HGCCCBVRGGGCW
SELEX
Jolma et al.(2013)
Tcfap2a_3
0.938 0.938
Tfap2a
M08704_2.00
Mus musculus
SCCYCRGGSNNN

NNNSCCYGRGGS
Misc
Kulakovskiy et al.(2013)
AP2A_MOUSE.H11MO.0.A
0.938 0.938
Tfap2b
M00112_2.00
Mus musculus
CCBSRGGSNW

WNSCCYSVGG
PBM
Badis et al.(2009)
Tcfap2b_3988
0.836 0.836
TFAP2B
M02753_2.00
Homo sapiens
HSCCYBVRGGCD

HGCCYBVRGGSD
SELEX
Jolma et al.(2013)
TFAP2B_1
0.836 0.836
TFAP2B
M02754_2.00
Homo sapiens
HGCCTSRGGCD

HGCCYSAGGCD
SELEX
Jolma et al.(2013)
TFAP2B_2
0.836 0.836
TFAP2B
M02755_2.00
Homo sapiens
WGCCCYBVRGGCD

HGCCYBVRGGGCW
SELEX
Jolma et al.(2013)
TFAP2B_3
0.836 0.836
TFAP2B
M04046_2.00
Homo sapiens
NSCCBNVGGSN

NSCCBNVGGSN
SELEX
Yin et al.(2017)
TFAP2B_eDBD_HT-SELEX
0.836 0.836
TFAP2B
M08701_2.00
Homo sapiens
GSCYGVGGRV

BYCCBCRGSC
Misc
Kulakovskiy et al.(2013)
AP2B_HUMAN.H11MO.0.B
0.836 0.836
Tfap2b
M08705_2.00
Mus musculus
GSCYGVGGRV

BYCCBCRGSC
Misc
Kulakovskiy et al.(2013)
AP2B_MOUSE.H11MO.0.B
0.836 0.836
TFAP2B
M09750_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP2BETA_Q3
0.836 0.836
TFAP2B
M04047_2.00
Homo sapiens
NSCCYNRGGSD

HSCCYNRGGSN
SELEX
Yin et al.(2017)
TFAP2B_eDBD_Methyl-HT-SELEX
0.836 0.836
TFAP2E
M04050_2.00
Homo sapiens
HSCCYSRGGSD

HSCCYSRGGSD
SELEX
Yin et al.(2017)
TFAP2E_FL_HT-SELEX_1
0.805 0.805
TFAP2E
M04051_2.00
Homo sapiens
NSCCBBVGGSCA

TGSCCBVVGGSN
SELEX
Yin et al.(2017)
TFAP2E_FL_HT-SELEX_2
0.805 0.805
TFAP2E
M04052_2.00
Homo sapiens
HSCCYSRGGSD

HSCCYSRGGSD
SELEX
Yin et al.(2017)
TFAP2E_FL_Methyl-HT-SELEX_1
0.805 0.805
TFAP2E
M04053_2.00
Homo sapiens
NSCCYNRGGGCR

YGCCCYNRGGSN
SELEX
Yin et al.(2017)
TFAP2E_FL_Methyl-HT-SELEX_2
0.805 0.805
Tfap2e
M00114_2.00
Mus musculus
NNGCCYBVGG

CCBVRGGCNN
PBM
Badis et al.(2009)
Tcfap2e_3713
0.800 0.800
Tfap2c
M00113_2.00
Mus musculus
NSCCBBVGGS

SCCBVVGGSN
PBM
Badis et al.(2009)
Tcfap2c_2912
0.754 0.754
Tfap2c
M08706_2.00
Mus musculus
NNSCCYGRGGSNN

NNSCCYCRGGSNN
Misc
Kulakovskiy et al.(2013)
AP2C_MOUSE.H11MO.0.A
0.754 0.754
TFAP2C
M02756_2.00
Homo sapiens
HSCCYBVRGGCD

HGCCYBVRGGSD
SELEX
Jolma et al.(2013)
TFAP2C_1
0.744 0.744
TFAP2C
M02757_2.00
Homo sapiens
HGCCTBRGGCD

HGCCYVAGGCD
SELEX
Jolma et al.(2013)
TFAP2C_2
0.744 0.744
TFAP2C
M02758_2.00
Homo sapiens
WGCCCYNRGGGCD

HGCCCYNRGGGCW
SELEX
Jolma et al.(2013)
TFAP2C_3
0.744 0.744
TFAP2C
M02759_2.00
Homo sapiens
HSCCYBVRGGCD

HGCCYBVRGGSD
SELEX
Jolma et al.(2013)
TFAP2C_4
0.744 0.744
TFAP2C
M02760_2.00
Homo sapiens
NGCCCBNVRGGCN

NGCCYBNVGGGCN
SELEX
Jolma et al.(2013)
TFAP2C_5
0.744 0.744
TFAP2C
M02761_2.00
Homo sapiens
HGCCTBRGGCD

HGCCYVAGGCD
SELEX
Jolma et al.(2013)
TFAP2C_6
0.744 0.744
TFAP2C
M04048_2.00
Homo sapiens
NSCYHNHRGBN

NVCYDNDRGSN
SELEX
Yin et al.(2017)
TFAP2C_eDBD_HT-SELEX
0.744 0.744
TFAP2C
M07783_2.00
Homo sapiens
NSCCYSRGGSCANDN

NHNTGSCCYSRGGSN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_AP2GAMMA_UCD
0.744 0.744
TFAP2C
M08702_2.00
Homo sapiens
NDSCCYCAGGSHHN

NDDSCCTGRGGSHN
Misc
Kulakovskiy et al.(2013)
AP2C_HUMAN.H11MO.0.A
0.744 0.744
TFAP2C
M09451_2.00
Homo sapiens
SCCYSRGGSHNN

NNDSCCYSRGGS
Misc
Heinz et al.(2010)
MCF7-TFAP2C_GSE21234
0.744 0.744
TFAP2C
M09751_2.00
Homo sapiens
GCCBBVRGS

SCYBVVGGC
Transfac
Matys et al.(2006)
V$AP2GAMMA_01
0.744 0.744
TFAP2C
M09752_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP2GAMMA_Q4
0.744 0.744
TFAP2C
M09753_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP2GAMMA_Q5_01
0.744 0.744
TFAP2C
M09754_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP2GAMMA_Q5
0.744 0.744
TFAP2C
M04049_2.00
Homo sapiens
NSCCYNRGGSN

NSCCYNRGGSN
SELEX
Yin et al.(2017)
TFAP2C_eDBD_Methyl-HT-SELEX
0.744 0.744
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000001651-D1 AP-2 163 365

Links

Other AP-2 family TFs
Other Bos grunniens TFs

364 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29693.m002035 Ricinus communis 29693.m002035 N 0.000
AMTR_s00014p00061870 Amborella trichopoda AMTR_s00014p00061870 N 0.000
Aquca_007_00897 Aquilegia coerulea Aquca_007_00897 I 0.000
Aquca_022_00160 Aquilegia coerulea Aquca_022_00160 N 0.000
AT2G34450 Arabidopsis thaliana AT2G34450 N 0.000
BGIOSGA004165 Oryza indica BGIOSGA004165 N 0.000
BGIOSGA004167 Oryza indica BGIOSGA004167 N 0.000
Bo4g182600 Brassica oleracea Bo4g182600 N 0.000
Bostr.18351s0219 Boechera stricta Bostr.18351s0219 I 0.000
Bostr.23794s0665 Boechera stricta Bostr.23794s0665 N 0.000
Bostr.7867s1415 Boechera stricta Bostr.7867s1415 I 0.000
Bra021911 Brassica rapa Bra021911 N 0.000
BRADI2G45927 Brachypodium distachyon BRADI2G45927 I 0.000
Cagra.1891s0017 Capsella grandiflora Cagra.1891s0017 I 0.000
Cagra.2350s0098 Capsella grandiflora Cagra.2350s0098 I 0.000
Cagra.7352s0006 Capsella grandiflora Cagra.7352s0006 N 0.000
Carubv10005973m.g Capsella rubella Carubv10005973m.g I 0.000
Carubv10014808m.g Capsella rubella Carubv10014808m.g I 0.000
Carubv10024236m.g Capsella rubella Carubv10024236m.g N 0.000
cassava6449.valid.m1 Manihot esculenta cassava6449.valid.m1 N 0.000
cassava7606.valid.m1 Manihot esculenta cassava7606.valid.m1 N 0.000
Ca_05162 Cicer arietinum Ca_05162 N 0.000
Ca_05164 Cicer arietinum Ca_05164 N 0.000
Ca_05351 Cicer arietinum Ca_05351 I 0.000
chr5.CM0180.220.nd Lotus japonicus chr5.CM0180.220.nd I 0.000
Ciclev10017037m.g Citrus clementina Ciclev10017037m.g N 0.000
Cucsa.047620 Cucumis sativus Cucsa.047620 N 0.000
estExt_fgenesh1_pm.C_880025 Physcomitrella patens estExt_fgenesh1_pm.C_880025 I 0.000
Eucgr.D00306 Eucalyptus grandis Eucgr.D00306 N 0.000
F775_05073 Aegilops tauschii F775_05073 I 0.000
fgenesh2_kg.4__1466__AT2G34450.2 Arabidopsis lyrata fgenesh2_kg.4__1466__AT2G34450.2 N 0.000
gene30574-v1.0-hybrid Fragaria vesca gene30574-v1.0-hybrid N 0.000
GLYMA05G25900 Glycine max GLYMA05G25900 N 0.000
GLYMA08G08840 Glycine max GLYMA08G08840 N 0.000
GLYMA10G43440 Glycine max GLYMA10G43440 I 0.000
GLYMA20G23370 Glycine max GLYMA20G23370 I 0.000
Gorai.011G042300 Gossypium raimondii Gorai.011G042300 N 0.000
Gorai.013G018500 Gossypium raimondii Gorai.013G018500 I 0.000
GRMZM2G024247 Zea mays GRMZM2G024247 N 0.000
GSMUA_Achr4G07950_001 Musa acuminata GSMUA_Achr4G07950_001 N 0.000
GSMUA_Achr4G15000_001 Musa acuminata GSMUA_Achr4G15000_001 N 0.000
gw1.106.59.1 Physcomitrella patens gw1.106.59.1 I 0.000
gw1.106.60.1 Physcomitrella patens gw1.106.60.1 I 0.000
HMG-1 Pisum sativum Q41026_PEA D 0.000
HMGB4 Arabidopsis lyrata fgenesh2_kg.3__3350__AT2G17560.1 I 0.000
HMGB5 Arabidopsis lyrata Al_scaffold_0007_498 I 0.000
HMGB5 Arabidopsis thaliana AT4G35570 I 0.000
LPERR01G21970 Leersia perrieri LPERR01G21970 N 0.000
Lus10015268.g Linum usitatissimum Lus10015268.g N 0.000
Lus10025391.g Linum usitatissimum Lus10025391.g N 0.000
MDP0000143506 Malus domestica MDP0000143506 N 0.000
MDP0000170945 Malus domestica MDP0000170945 N 0.000
MDP0000392251 Malus domestica MDP0000392251 N 0.000
MDP0000695104 Malus domestica MDP0000695104 N 0.000
mgf009922m Mimulus guttatus mgf009922m N 0.000
MLOC_7069 Hordeum vulgare MLOC_7069 N 0.000
MTR_1g115220 Medicago truncatula MTR_1g115220 I 0.000
MTR_3g115580 Medicago truncatula MTR_3g115580 I 0.000
MTR_4g094622 Medicago truncatula MTR_4g094622 N 0.000
MTR_7g068280 Medicago truncatula MTR_7g068280 I 0.000
OB01G34910 Oryza brachyantha OB01G34910 I 0.000
OBART01G25720 Oryza barthii OBART01G25720 N 0.000
OGLUM01G29550 Oryza glumaepatula OGLUM01G29550 N 0.000
OMERI01G23390 Oryza meridionalis OMERI01G23390 N 0.000
orange1.1g031573m.g Citrus sinensis orange1.1g031573m.g N 0.000
ORGLA01G0210300 Oryza glaberrima ORGLA01G0210300 N 0.000
ORUFI01G28620 Oryza rufipogon ORUFI01G28620 N 0.000
OS01G0666200 Oryza sativa OS01G0666200 N 0.000
Pavir.Eb02691 Panicum virgatum Pavir.Eb02691 I 0.000
Pavir.J05892 Panicum virgatum Pavir.J05892 N 0.000
PK22924.1 Cannabis sativa PK22924.1 N 0.000
POPTR_0004s13630 Populus trichocarpa POPTR_0004s13630 N 0.000
PRUPE_ppa013152mg Prunus persica PRUPE_ppa013152mg N 0.000
SapurV1A.0560s0060 Salix purpurea SapurV1A.0560s0060 N 0.000
Sb03g030540 Sorghum bicolor Sb03g030540 N 0.000
Si003021m.g Setaria italica Si003021m.g N 0.000
TCM_029514 Theobroma cacao TCM_029514 N 0.000
TCM_042534 Theobroma cacao TCM_042534 I 0.000
Thhalv10017360m.g Eutrema salsugineum Thhalv10017360m.g N 0.000
Traes_3DL_21C50DDF5 Triticum aestivum Traes_3DL_21C50DDF5 N 0.000
TRIUR3_17277 Triticum urartu TRIUR3_17277 N 0.000