CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Minc03293
(
Meloidogyne incognita
)
AP-2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03299 (TF_AP-2)
IPR013854
Minc03293
T011267_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc03293
AP-2
198
410
RIFAQVPGRLSLLSNVVKYKMTVGEVKRRLMGPESFNFSLLGALLRRAKMPEKSQMLIEELNQVGLSIPRGRRRLSQVTLLSALTEAESLQLANDFKKITESEFPTRLMAIEALDSFKQSTPSILPGTCDNENLNSIRLQKLQAAIKLTKQFLELMGRDTSPMMENNMEPLLDEELQAPLSTFSMLTHGFGNPAIQVGVNCFLRILEEQVKII
Links
Other
AP-2
family TFs
Other
Meloidogyne incognita
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc00179
Meloidogyne incognita
Minc00179
N
0.987
augustus_masked-nMf.1.1.scaf12580-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf12580-processed-gene-0.0
N
0.966
MhA1_Contig440.frz3.gene9
Meloidogyne hapla
MhA1_Contig440.frz3.gene9
N
0.903
snap_masked-nMf.1.1.scaf23364-processed-gene-0.1
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf23364-processed-gene-0.1
N
0.760
augustus_masked-nMf.1.1.scaf04706-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf04706-processed-gene-0.0
N
0.735