KUCA_T00003802001 (Kuraishia capsulata)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04383 (KilA-N) IPR018004 KUCA_T00003802001 T012037_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU07246
M01653_2.00
Neurospora crassa
NDCRCGN

NCGYGHN
PBM
Weirauch et al.(2014)
pTH8957
0.725 0.600
estExt_fgenesh2_pg.C_10694_CONSTRUCT
M01102_2.00
PBM CONSTRUCTS
NNACGCGW

WCGCGTNN
PBM
Lambert et al.(2019)
pTH9838
0.721 0.512
MBP1
M00003_2.00
Saccharomyces cerevisiae
VACGCGWD

HWCGCGTB
PBM
Badis et al.(2008)
MBP1_4486
0.714 0.550
MBP1
M01514_2.00
Saccharomyces cerevisiae
NNNNDCRCGH

DCGYGHNNNN
PBM
Zhu et al.(2009)
Mbp1
0.714 0.550
MBP1
M07434_2.00
Saccharomyces cerevisiae
NDCGCGH

DCGCGHN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0329.1
0.714 0.550
MBP1
M08472_2.00
Saccharomyces cerevisiae
NDCGCGH

DCGCGHN
Misc
DeBoer et al.(2011)
YDL056W_500
0.714 0.550
ANIA_03154
M01650_2.00
Aspergillus nidulans
NNACGCG

CGCGTNN
PBM
Weirauch et al.(2014)
pTH8232
0.691 0.400
NCU07587
M01654_2.00
Neurospora crassa
NNNDCRCGN

NCGYGHNNN
PBM
Weirauch et al.(2014)
pTH9687
0.664 0.425
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CDK27823 APSES 20 101

Links

Other APSES family TFs
Other Kuraishia capsulata TFs

386 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PGSC0003DMG400038899 Solanum tuberosum PGSC0003DMG400038899 N 0.000
Solyc02g033100.1 Solanum lycopersicum Solyc02g033100.1 N 0.000
Solyc02g033110.1 Solanum lycopersicum Solyc02g033110.1 N 0.000
Solyc02g033120.1 Solanum lycopersicum Solyc02g033120.1 N 0.000
Solyc02g036120.1 Solanum lycopersicum Solyc02g036120.1 N 0.000
Solyc02g036140.1 Solanum lycopersicum Solyc02g036140.1 N 0.000
Solyc02g036170.1 Solanum lycopersicum Solyc02g036170.1 N 0.000
Solyc02g036200.1 Solanum lycopersicum Solyc02g036200.1 N 0.000
Solyc07g049120.1 Solanum lycopersicum Solyc07g049120.1 N 0.000
Solyc07g049130.1 Solanum lycopersicum Solyc07g049130.1 N 0.000