AMTR_s00022p00128600 (Amborella trichopoda)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 AMTR_s00022p00128600 T014137_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARID3
M06695_2.00
Arabidopsis thaliana
AAWWHNAAATYAAWW

WWTTRATTTNDWWTT
Dap-seq
OMalley et al.(2016)
AT2G17410_col_a
0.704 0.835
ARID6
M06694_2.00
Arabidopsis thaliana
HAATTRAWTTN

NAAWTYAATTD
Dap-seq
OMalley et al.(2016)
AT1G20910_col_a
0.609 0.753
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN11522 ARID/BRIGHT 185 270

Links

Other ARID/BRIGHT family TFs
Other Amborella trichopoda TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AUEXF2481DRAFT_70131 Aureobasidium subglaciale AUEXF2481DRAFT_70131 N 0.000
Pc16g04620 Penicillium chrysogenum Pc16g04620 N 0.000
PDIP_74150 Penicillium digitatum PDIP_74150 N 0.000
PEX1_084400 Penicillium expansum PEX1_084400 N 0.000
PITC_028550 Penicillium italicum PITC_028550 N 0.000
PDE_04912 Penicillium oxalicum PDE_04912 N 0.000
PCH_Pc16g04620 Penicillium rubens PCH_Pc16g04620 N 0.000
PCH_Pc18g01480 Penicillium rubens PCH_Pc18g01480 N 0.000
U727_00431295161 Penicillium solitum U727_00431295161 N 0.000